Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2226 ATGTCTCCAAAGAAAATTCAATGGAAAGCTTTTGTATTTGGTTGTTTCAAGGACAACAAACAACATCCTACCTTGGAAACACCAAAATTTGTTTCAAAAAAGACAGGTTCAAGTAGAATTTCTCTATCTGATTTAAGTGATTATTCATCACCTTCTGTTATGAGTGATTTATCCAATTCATTAGTGGGATCAAATCTTCATATTTTCACTTGTAAAGAACTCAAAGAGATCACAAACAATTTCAACAAATCAAATTTTCTTGGAGAAGGTGGATTTGGAAAAGTATACAAAGGTTTTATTGATGATAAACTTAGGCCTACACTTGTTCCTCAAGCTGTTGCTGTTAAAGCCTTAAACTTGGATGGAAAACAAGGCCATAGAGAGTGGTTGGCTGAAGTAATCTTTTTGGGGCAGTTAAGGCATCGCAATCTTGTAAACTTAATTGGTTATTGTTATGAAGATGAACATAGACTTCTTGTGTATGAATACATGGAAAGAGGAAGTCTTGAAGAAAAACTTTTCAAAGGTTATTTAGCAACCTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCTAAAGGATTAGCTTTTCTTCATGAAGAAGAAAAACCAGTTATATATAGAGATGTTAAAGCCTCAAATATTCTATTGGATGCTGATTACAATGCTAAGCTTTCAGATTTTGGTTTAGCAATTGATGGACCAGATAAAGATCAAACACATATTACAACTCGTGTGATGGGGACACAAGGTTATGCAGCTCCTGAATATATCAATACAGGTCGTTTGACAACAATGAGTGATGTATATAGTTTTGGAGTTGTTCTTTTAGAGCTACTAACAGGAAAGAAATCAGTGGACAAAAAAAGACCTACAAGAGAACAAGATTTAGTAGAATGGGCAAGACCATTATTGAAAGATTCATACAAACTTGAAAGAATAATTGATTCAAGACTTGAAGATCAATATTCAATTGAAGGTGCTAGAAAATTAGCATGCTTAACTTATCAATGTCTAAGTCATCATGATAAAAGTAGACCAAGCATGAGAAATGTTGTTAAGACATTACAATCTATCATGAAATTAAATGACATTCCAATTGGTCATTTTGTTTATGTGGCACCTAGTGAAGTAACAAATGTTGAAGTGTCATTAAATGTGAATCACAAAAATGGACTAGAAAATGTATGTGATGAGAATGTGAATGTGATCAACAAAAATGTTGTGAAAACTAAAGATGAAGAAAAGGGAGAGAAAAATGAAAAGGGTCGCGAAATTCGTCGAAAAAGTCGTAGCACACAACGACGTGTTAAGGCGTTGATGAGGTCTCGTTCGGTTTACTCTGACACTGCTTTGTATAAGACTCTTGGAACAAATTTGTATTCACCTAAGCAAAGCAAGGAGAAGCAACAAGAAGTGGAAATTTGCCAATATTAG 1443 0.3389 MSPKKIQWKAFVFGCFKDNKQHPTLETPKFVSKKTGSSRISLSDLSDYSSPSVMSDLSNSLVGSNLHIFTCKELKEITNNFNKSNFLGEGGFGKVYKGFIDDKLRPTLVPQAVAVKALNLDGKQGHREWLAEVIFLGQLRHRNLVNLIGYCYEDEHRLLVYEYMERGSLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDKDQTHITTRVMGTQGYAAPEYINTGRLTTMSDVYSFGVVLLELLTGKKSVDKKRPTREQDLVEWARPLLKDSYKLERIIDSRLEDQYSIEGARKLACLTYQCLSHHDKSRPSMRNVVKTLQSIMKLNDIPIGHFVYVAPSEVTNVEVSLNVNHKNGLENVCDENVNVINKNVVKTKDEEKGEKNEKGREIRRKSRSTQRRVKALMRSRSVYSDTALYKTLGTNLYSPKQSKEKQQEVEICQY* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2226 480 PANTHER BNAA02G16030D PROTEIN 30 419 - -
Tpr5g2226 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tpr5g2226 480 MobiDBLite consensus disorder prediction 416 430 - -
Tpr5g2226 480 MobiDBLite consensus disorder prediction 416 441 - -
Tpr5g2226 480 Gene3D Phosphorylase Kinase; domain 1 47 163 - -
Tpr5g2226 480 Gene3D Transferase(Phosphotransferase) domain 1 164 369 - -
Tpr5g2226 480 SUPERFAMILY Protein kinase-like (PK-like) 54 358 IPR011009 -
Tpr5g2226 480 PANTHER OS01G0588500 PROTEIN-RELATED 30 419 - -
Tpr5g2226 480 SMART serkin_6 81 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2226 480 CDD STKc_IRAK 87 361 - -
Tpr5g2226 480 Pfam Protein tyrosine and serine/threonine kinase 84 358 IPR001245 GO:0004672|GO:0006468
Tpr5g2226 480 ProSiteProfiles Protein kinase domain profile. 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2226 480 ProSitePatterns Protein kinases ATP-binding region signature. 87 116 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2226 Tpr-Chr5 43269351 43272126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2226 18 387 Glycoside Hydrolase AT3G07070 44.415 2.19e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr5g2226 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2226 - - gmx:100790454 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2226 5 43269351 43272126 Tpr5g2226 5 43269351 43272126 ECH
Tpr5g2226 5 43269351 43272126 Tpr7g0753 7 6688772 6691884 ECH
Tpr5g2226 5 43269351 43272126 Tpr1g3503 1 39235390 39238739 ECH