Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2224 ATGACCCATTCACCTGCAAATACTCATCACAATCACAACCCTCCAATTCCAGCGAAGATGGCACCAATACAATTATTGGAGCTTCCTAGTTGGATCACATTATTGACAACATTTGCCATCCTCCTCCTCTTCAGCCACCGTCTCCGCCGTCGCAGCAAATACAATCTACCACCAGGTCCAAAACCATGGCCCATAATAGGAAATCTTAACCTTATTGGATCCCTCCCACATCAATCCCTCCATGGTCTCACCCAAAAATATGGACCCATGATGTATCTATGGTTCGGCTCCAAACCCGTCATTGTGGGCTCAACCGTAGAATTAGCCAGAGCCTTCCTCAAAACCAATGATGCTGCTCTAGCCGGCCGTCCCAAATTTTCGGCCGGTAAATACACAACTTATAACTACTCCGATATAACTTGGTCCCAATATGGTCCATATTGGCGTCAAGCCCGTAGAATGTGTTTGTTAGAATTGTTTAGTGCGAAACGTCTCGAGTCTTATGAGTACATAAGGAAACAAGAGTTACATGCTTTTTTGCATGAACTCTTCAATTCGAAAAATAAAACAATTGTGTTGAAAGACCATCTTACAACTTTGAGTCTAAATGTTATAAGTCGTATGACGTTAGGAAAAAAATACTTAGAAGAGACTGAAAATGCTATTATTTCTCCAGAGGAGTTTAAGAAGATGTTGGATGAGTTGTTTTTACTTAATGGAATCCTTAATATTGGGGATTTTATTCCTTGGATTCATTTCTTGGATTTACAAGGTTATGTGAAGAGGATGAAAGCTTTGAGTAAAAAATTTGATAGATTCATGGAACATGTGTTGGAGGAACATATTGAAAGGAGGAAAAGTGTTAAGGATTATGTTGCTAAAGATATGGTGGATGTGCTTTTGCAGCTTGCTGAGGATCCTACTCTTGAAGTTAAACTTGAGAGGCATGGAGTCAAAGCTTTTACTCAGGACATTATAGCAGGTGGCACAGAGAGCTCAGCAGTAACAGTTGAATGGGCAATCTCAGAGCTAATAAGAAAGCCAGAGATCTTCAAGAGAGCAACAGAGGAGTTAGACAGAGTAATAGGAAAAGATAGATGGGTTGAAGAGAAAGACATTGTGAATTTACCTTATGTATATGCAATTGCTAAAGAAACAATGAGGCTACATCCAGTGGCACCAATGTTAGTCCCACGACAAGCGAGAGAAGATTGTCATGTTGATGGTTACGATATCCCGAAAGGAACTCAAATTCTTGTCAATACTTGGACAATTGGAAGAGATCCCAATATTTGGGAAAATCCATATGAGTTTATGCCTGAGAGGTTTCTTGGTAAAAATATAGATGTAAAAGGACATGATTACGAGTTATTACCATTTGGCGCTGGTAGAAGAATGTGTCCGGGTTACCCTCTTGGTATTAAGGTCATTCAATCAAGTTTGGCTAACTTGTTGCATGGATTTAATTGGAGATTAAGTGATAATAATGTGAAAAATGAGGATTTGAATATGGAGGAGATTTTTGGGCTCTCTACACCTAAGAAAATACCATTAGAAGTTGTTTCGGAGCCTAGACTTGCTGATCATCTTTACTCACTTTGA 1602 0.3945 MTHSPANTHHNHNPPIPAKMAPIQLLELPSWITLLTTFAILLLFSHRLRRRSKYNLPPGPKPWPIIGNLNLIGSLPHQSLHGLTQKYGPMMYLWFGSKPVIVGSTVELARAFLKTNDAALAGRPKFSAGKYTTYNYSDITWSQYGPYWRQARRMCLLELFSAKRLESYEYIRKQELHAFLHELFNSKNKTIVLKDHLTTLSLNVISRMTLGKKYLEETENAIISPEEFKKMLDELFLLNGILNIGDFIPWIHFLDLQGYVKRMKALSKKFDRFMEHVLEEHIERRKSVKDYVAKDMVDVLLQLAEDPTLEVKLERHGVKAFTQDIIAGGTESSAVTVEWAISELIRKPEIFKRATEELDRVIGKDRWVEEKDIVNLPYVYAIAKETMRLHPVAPMLVPRQAREDCHVDGYDIPKGTQILVNTWTIGRDPNIWENPYEFMPERFLGKNIDVKGHDYELLPFGAGRRMCPGYPLGIKVIQSSLANLLHGFNWRLSDNNVKNEDLNMEEIFGLSTPKKIPLEVVSEPRLADHLYSL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2224 533 Pfam Cytochrome P450 57 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 Gene3D Cytochrome P450 49 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Tpr5g2224 533 SUPERFAMILY Cytochrome P450 57 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PANTHER STEROID 21-HYDROXYLASE-RELATED 29 524 - -
Tpr5g2224 533 PANTHER CYTOCHROME P450 71A1-LIKE 29 524 - -
Tpr5g2224 533 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2224 533 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2224 Tpr-Chr5 43247960 43251823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2224 38 533 Cytochrome P450 AT5G07990 42.012 5.90e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2224 K20623 - ag:AAG44132 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2224 5 43247960 43251823 Tpr5g2224 5 43247960 43251823 ECH