Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2205 ATGGTTGTAGCTAGGGAGTGTTGTAATTCTAAAATATTGAGAGAAATGGAAAACTTGCCCAAATCATCATATCCAAGTATATTGCAGAGTGAGAATTTGACTAAGTATATACTTGAGAGCAGCGTTTATCCACGAGAACATGAAACTCTCAAAGAAATAAGAAATGTCACTGCAAGCTACCCTATGGGTTTCATGATCAGTGCACCTGATGCTGCTCAGCTAATAGCCGTACTCTTGAGGTTGCTAAATGCTAAGAAGACAATTGAAGTTGGAGTTTTTACTGGATACTCTCTTCTTCTCACTGCACTTACCATTCCTGATGATGGAAAGATTATAGCTGTGGATCCAGACAGAAAAGCTTATGAAGTAGGACTTCCATCAATTAAAAAAGCAGGTGTAGAACACAAGATTGACTACATAGAGTCTCGAGCATTACCAATTCTTGATAAACTCTTAGAAGATCCTTCAAATGATGGAAATTTCGACTTTGCTTATGTTGATGCTGATAAAGAAAATTATTGGAATTATCACGAGAGGTTTATTAAACTGATTAAAATTGGTGGATTAATTATCTATGATAACACTCTTTGGGGTGGAACTGTTGCATTGCCAGAAGAACTTGTTCCAGGTTCTTTGAGAAAAACAAGACAAGATGCACTTGCTTTCAACAAAGCAATTTCGAGTGATACTCGTGTTGAGATTTCTCTTGTTTCAATTGGTGATGGTTTCACTATATGTAGGCGTATTCATTGA 753 0.3665 MVVARECCNSKILREMENLPKSSYPSILQSENLTKYILESSVYPREHETLKEIRNVTASYPMGFMISAPDAAQLIAVLLRLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIAVDPDRKAYEVGLPSIKKAGVEHKIDYIESRALPILDKLLEDPSNDGNFDFAYVDADKENYWNYHERFIKLIKIGGLIIYDNTLWGGTVALPEELVPGSLRKTRQDALAFNKAISSDTRVEISLVSIGDGFTICRRIH* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2205 250 CDD AdoMet_MTases 88 192 - -
Tpr5g2205 250 Gene3D Vaccinia Virus protein VP39 18 250 IPR029063 -
Tpr5g2205 250 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 248 IPR029063 -
Tpr5g2205 250 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 26 249 IPR002935 GO:0008171
Tpr5g2205 250 Pfam O-methyltransferase 39 249 IPR002935 GO:0008171
Tpr5g2205 250 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 20 250 - -
Tpr5g2205 250 PANTHER O-METHYLTRANSFERASE-RELATED 20 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2205 Tpr-Chr5 43017654 43020692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2205 19 250 Monolignol Biosynthesis Gene Families AT4G26220 61.207 2.55e-107 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2205 K00588 - gmx:100780516 367.081