Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2198 ATGTCCTCACCGGAAAATCTCCCATTAGAAACCGCTCAAAAAATCATTCTCCGATGGGACTCAACCGCTTCCGAAGAAGCTCGCGAAAAAATGATCTTCGATCAAACCACCGCAAATCGTGAAGAAATCGATCTTTATCTCCAAGCCGTCGATGAAATCCAACGCTCCATATCCTCCACCTCTCTCTCCGACGACCACCACCACACAAAACCTACCTCCACCATCCAGATCGCCATGGCTCGCTTAGAAGACGAGTTTCGTAACATCCTTATCTCTCACACAAATCCAATCGATCCTTCTTTAGATGAAGATTCTTCGTTTTCTTCAAAACGACTTAACGAAGATGAAGTTAGTTACGGCGGCGATAATGATGATGAAGATGATGATAAGCTTCTTCGTTTTGATTCTACTTGTTCTGTTGCTACTACTGCTACTACAACTTCAAGTTACCGATCAACTAGTAGCATCCGTGAGATCGATCTGATACCTTCTGAAGCAGTTTCCGATCTCCGGTGTATCGCCGATAGAATGATTTCATCCGGTTATCTACGTGAGTGTATTCAAGTTTATGGAAGTGTGAGAAAATCTGCTGTTGATTCGAGTTTTAAGAAACTCGGTGTTGAGAAATTGAGTATTGGTGATGTTCAGAGATTGGATTGGGAACAGTTAGAAACGAAGATTCGGAGATGGATTAGAGCGGCTAAGGTTTGTGTTCGAACGCTTTTCGCGAGTGAGAAGAGATTATGTGAACAGATTTTTGATGGAATTGGTACTTCTATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCAATTCAGCTTTTCAATTTTGCTGAAGCTATTAGTATTAGTCGTAGATCGCCCGAAAAATTGTTTAAGATACTTGATCTTCATGATGCTTTAATGGATTTGATTCCTGATATTGATGCTGTTTTTGATTCTAAGTCGTCTGAATCGATTAGGGTTCAGGCGGCTGAGATTTTGTCGCGTTTAGCGGAAGCTGCTAGAGGGATTTTATCTGAATTTGAAAATGCTGTTCTTAAGGAGCCTTCTAAGGTTCCTGTTCCTGGCGGAACGATTCATCCTTTGACTAGGTATGTTATGAATTATATAAGCTTGATTTCTGATTATAAGCAGACTTTGTATGAGCTTATAGTTTCGAAGCCTTCAAATGGTTCGAGGAATTCGGGTGATCCTTTGAGTCCTGATATGGATTTCGATGAGGTTGAAGAGAAACCGCCTTTGGCTATTCATTTGATTTGGATTATTGTTATATTGCAATTTAATTTGGATGGTAAGTCAAAGCATTATAAAGATGCTTCTTTGTTGCATTTGTTTATAATGAACAATGTTCATTATATTGTTCAAAAGGTTAGAGGGTCGCCCGAGTTGAGGGAAATGATCGGGGATGATTATTTGAAGAAGTTGACTGGGAAATTTCGACAGGCTGCTACTAGCTATCAGAGAGCAACTTGGGTTAGGGTTTTGTATTGTTTGAGAGATGAAGGGTTACATGTGAGTGGTGGATTTTCTTCTGGTGTGTCGAAGAGTGCTTTGAGGGAAAGGTTTAAGGCTTTCAATGCTATGTTTGAGGAGGTACATAGGACTCAAGCTGTTTGGTTGATACCGGATTCGCAACTTAGGGAGGAGCTTCGGATTTCTATATCGGAGAAGCTGATTCCCGCGTATAGGTCGTTCCTTGGACGGTTCAGGAGCCATATCGAGAGTGGAAGACATCCGGAGAATTACATTAAGTATTCTGTTGAGGATTTGGAGGATGCTGTTTTGGATTTTTTCGAAGGGATTCCTGTTTCGCAGCACACGAGAAGGAGATCTCAGTGA 1848 0.4107 MSSPENLPLETAQKIILRWDSTASEEAREKMIFDQTTANREEIDLYLQAVDEIQRSISSTSLSDDHHHTKPTSTIQIAMARLEDEFRNILISHTNPIDPSLDEDSSFSSKRLNEDEVSYGGDNDDEDDDKLLRFDSTCSVATTATTTSSYRSTSSIREIDLIPSEAVSDLRCIADRMISSGYLRECIQVYGSVRKSAVDSSFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFDGIGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDAVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLYELIVSKPSNGSRNSGDPLSPDMDFDEVEEKPPLAIHLIWIIVILQFNLDGKSKHYKDASLLHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2198 615 MobiDBLite consensus disorder prediction 94 127 - -
Tpr5g2198 615 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 615 - -
Tpr5g2198 615 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 615 IPR004140 GO:0000145|GO:0006887
Tpr5g2198 615 MobiDBLite consensus disorder prediction 104 118 - -
Tpr5g2198 615 SUPERFAMILY Cullin repeat-like 40 602 IPR016159 -
Tpr5g2198 615 Pfam Exo70 exocyst complex subunit 229 597 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr5g2198 615 Gene3D Exocyst complex component Exo70 15 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2198 Tpr-Chr5 42931165 42933872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2198 9 615 EXO70 exocyst subunit family AT1G72470 69.502 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2198 K07195 - gmx:100808671 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2198 5 42931165 42933872 Tpr5g2198 5 42931165 42933872 ECH