Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2197 ATGGCCATAATAGCTTCTGCAATTTTTCATCCAAAATTCTTCATCTTGATCTTCAACATCATCATAAATTTTTCCATGACATGTTCAATGTCAGAAGCAGAAGCTTTATTGAGCCTAAAAAACTCATTTTCAAATTCAGAAGCACTTGATAATTGGATTGCCAACACTTTTCCTTGTACCGACGACGATCAATGGGCAGGCGTTGTTTGTTACAACGGTTTAGTAACCGGTCTACGCCTCCGTGGAATGGGACTATTCGGAAAAATTGATGTTGATGCATTGCTTGAACTTAAAGGTTTAAGAACTATTAATCTTATGAATAATTCTTTCACCGGTTCGATTCCTGAATTGAATCGAATCGGTTTCTTGAAAGCGATGTATTTATCGGGAAATAAATTTTCGGGAAATATTCCTCGGGACTATTTCCAAAGAATGAAATCATTGAAGAAAGTTTGGTTATCAAATAATGAATTCACAGGTGATATTCCATCATCATTAGCTGAGATTCCTCACCTTGTTGAATTACATCTTGAAAATAATCAATTTAGTGGTAACATTCCAAATTTCAACAATCCTTCATTGGTGAAAATTGATGTTTCAAACAATAATTTAGAAGGTGAAGTTCCCGAAGGTTTGATGAGATTTAATCAAAGTTCTTTTCAAGGGAATTCGGGTTTATGTGGCGAGAAAATCGGTACAATATGTGGAAAACCAATGGAACAAACAAATCCTATTGGAGCACATAATATGAATAATATGCCAGAATTTAAGAACAATAATGATAATGTTTATATGAATGTGACTGATAAAAGTAAGCATAGGTCATTGCAGATTATTGGTATTGTTATAACAATTTTAGTACTAATTTCACTTGCAATATTCTTGATTATGAAATCAAAGAAAAAAAAAGAGAAAGTTAAATTTGATGATGAAATCGGTGCGAATAATCGACAAGGAAGTACTAATGATATTGGTAGTGTTGAAGTTCAAGTAAGTAGTGGTAATAATAGTATTAGTAATAGTACTAATCAAGTGAAAAAAGATATGAATGTAGTGAAAAAAACACCATCTGGTAGTAGAAGACATTCATCTCATGGTAGTAAAGGAGGGATTGGTGAGCTTATAATGATGAATGATGATAAGGGTGTGTTTGGTTTACCTGATTTAATGAAAGCTTCTGCAGAAGTGCTTGGAAATGGAGGGTTTGGATCATCTTATAAAGCTGTTTTGTCTAATGGTATGGCTGTGGTTGTGAAAAGAACTAGAGAGTTGAATGGTTTAGGAAAAGATGGTTTTGAAGCTGAGATGAAAAGACTTGGAAGGGTTAAACATTGGAATGTTTTGACTCCTTTGGCTTATCATTATAGAAAGGATGAGAAATTAGTGATTTCTGAGTATGTTCCTAAAGGAAGTCTTCTCTATTTGCTGCATGGTGATAGAGGACCATCACATGCAGAACTAGATTGGAACACACGTTTAAAGATTGTACAAGGAATTGCAAAAGGAATGCATTATCTTCACACAGAACTTGCTTCTTCTGATCTACCACATGGAAACTTAAAATCAAGCAATATTCTACTTGGACCAGATTATGAACCATTTCTCATGGACTTTGGTTTCATCAATCTAGTTCCCCCTTCAAGTTATGCACAAACATTATTTGGTTATAAAGCTCCAGAAGCATTAAAAAACAACAAAGTTTCACCTCGTTGCGACGTATACTGTCTCGGAGTAGTCATACTCGAAATACTAACCGGAAAATTTCCATCTCAGTATCTTAACACCGGTAAAGGCGGAACCGATATAGTACAATGGGTAGCATCAGCAATTTCTGAAGGAAGAGAAGTTGAATTACTTGATCCTGAAATTTCAAGTAATAAAAAATCATTAAGTGAAATGCAGAACCTTCTTCATATCGGTGCGGCTTGTTCCGAAAGTAATCCTCAAAAGAGATTAGACATGTTTGAAGCAATTAGAAGAATAGAAGGTATTAAAACAAAAGGTGTACATTTTCAAGAACAAGTTCAAGAATCAAGAACAATAGAAGTTTTACCATCTCTTAGAGATGGTTTTGCAGATTCTTCTCAAGCATATGATAATCAAGGACATTTTGGTGATGAATCAAGAAGAAGACATGGAACAAGTAGTGTTGGAAATAAGGATAATATTGAATTTGGTGTAGCATAA 2187 0.342 MAIIASAIFHPKFFILIFNIIINFSMTCSMSEAEALLSLKNSFSNSEALDNWIANTFPCTDDDQWAGVVCYNGLVTGLRLRGMGLFGKIDVDALLELKGLRTINLMNNSFTGSIPELNRIGFLKAMYLSGNKFSGNIPRDYFQRMKSLKKVWLSNNEFTGDIPSSLAEIPHLVELHLENNQFSGNIPNFNNPSLVKIDVSNNNLEGEVPEGLMRFNQSSFQGNSGLCGEKIGTICGKPMEQTNPIGAHNMNNMPEFKNNNDNVYMNVTDKSKHRSLQIIGIVITILVLISLAIFLIMKSKKKKEKVKFDDEIGANNRQGSTNDIGSVEVQVSSGNNSISNSTNQVKKDMNVVKKTPSGSRRHSSHGSKGGIGELIMMNDDKGVFGLPDLMKASAEVLGNGGFGSSYKAVLSNGMAVVVKRTRELNGLGKDGFEAEMKRLGRVKHWNVLTPLAYHYRKDEKLVISEYVPKGSLLYLLHGDRGPSHAELDWNTRLKIVQGIAKGMHYLHTELASSDLPHGNLKSSNILLGPDYEPFLMDFGFINLVPPSSYAQTLFGYKAPEALKNNKVSPRCDVYCLGVVILEILTGKFPSQYLNTGKGGTDIVQWVASAISEGREVELLDPEISSNKKSLSEMQNLLHIGAACSESNPQKRLDMFEAIRRIEGIKTKGVHFQEQVQESRTIEVLPSLRDGFADSSQAYDNQGHFGDESRRRHGTSSVGNKDNIEFGVA* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2197 728 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 669 - -
Tpr5g2197 728 Gene3D Transferase(Phosphotransferase) domain 1 467 684 - -
Tpr5g2197 728 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tpr5g2197 728 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Tpr5g2197 728 SUPERFAMILY Protein kinase-like (PK-like) 395 661 IPR011009 -
Tpr5g2197 728 ProSiteProfiles Protein kinase domain profile. 391 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2197 728 Gene3D Phosphorylase Kinase; domain 1 390 466 - -
Tpr5g2197 728 Pfam Protein kinase domain 395 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2197 728 SUPERFAMILY L domain-like 27 214 - -
Tpr5g2197 728 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Tpr5g2197 728 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 669 - -
Tpr5g2197 728 MobiDBLite consensus disorder prediction 703 717 - -
Tpr5g2197 728 Gene3D Ribonuclease Inhibitor 194 229 IPR032675 -
Tpr5g2197 728 MobiDBLite consensus disorder prediction 702 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2197 Tpr-Chr5 42907251 42910905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2197 20 664 Receptor kinase-like Gene Family AT3G42880 45.840 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr5g2197 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2197 - - mtr:MTR_8g021350 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2197 5 42907251 42910905 Tpr5g2197 5 42907251 42910905 ECH