Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2179 ATGTCTACTGATAAAGCAAATTCTACAGGCATGGAGGACAAGAGTAATGAAACAATAGAGACAAGCGACAAAGAGAGTAATACATCACCTCCTAAGCTTCGCCATCGCCGTTTAAACTCATTCGATGTCGAAGCCGGAGTTTCCAACATCACTGGTCACTCCTCTAAGTTGAGTTGGGCGGCAACTATTTCATTAGCATTTCAAAGCTTGGGAGTTGTATATGGTGATATTGGAACATCTCCACTTTATGTGTTTGCAAGCACATTCACAAATGGTACTATTGATCATAGTGATGACATTCTTGGGGTCTTATCTATCATATATTATACCATTTTGGTCTTCCCATTGCTCAAATATTGTTTCATTGTACTTTTGGCTAACGACAATGGCAATGGTGGGGCGTTTGCACTATATTCACTACTATGTAGACATGCCAAAGTGAGTTTGATTCCAAATCAACAACCAGAAGACATGCAGCTTTCTAATTACAAACTAGAAACACTTTCTAGTAATCAAAAGTTGAAGCAAAAGATTGAAACCAATTATTTTACACGTGTGCTTTTTTTATTTATGACTATTTTGGGAGCTACTATGGTTATAGGAGATGGAATTTTCACTCCTCCAATGTCAGTTATTTCTGCAGTAAGCGGTATCAGTTCTAAATTAGGTCAAGACTATGTTGTCGGTATCACTGTAGTGATATTGGTCGCTCTTTTTATGGCTCAAAGATTTGGTACTAATAAAGTAGGATTTTCATTCGCTCCAATTATAACCATATGGTTTATATTAATTGGAGGAATTGGTATTTACGACTTGTTCAAATATGATGTTGGGGTATTACGTGCTATTAATCCAAAATATATTGTTGATTACTTTCAACGTGATGGTAAAAAAGCATGGATGTCACTTGGTGGAGTATTTTTATGCATCTCAGGATGTGAAGCCATGTTCGCTGATTTGGGTCACTTCAGTGTTCGAGCCATTCAAATTAGTTTCTCTTTTATTACACTTCCAGCAATATTGGCAGCATATAGTGGACAAGCAGCATATCTCCGAAAGTTCCCTCACACTGTGTCAAATATTTTCTATGAATGCATACCTGGTCCTTTGTATTGGCCAACATTTGTTATTGCTGTTATTGCCTCCATCATAGCAAGTCAAGCAATAGTTTCAGGAGCATTTTCCATTGTATCTCAAGCTTTAAGTATGGGTTGTTTTCCAAGGGTTAAGGTTGTGCATACTTCTGCTTCACATGAAGGCCAAGTTTATATTCCTGCAGTCAACTATATGTTCTTGTTTGCATGTGTTGCAGTTACTATTATCTTCAGAACCGCGGAAAAGCTTAGTAATGCATATGGGTTTGCAATAATTTGTGATATGACGATCACAACATTTTTGGTTTCCATTGTAATGTTGATTGTATGGAAGAAAAACATATGGCAAGTAGCTCTATTTTCTATCCCATTTGGTTGCATTGAGTTAATATATTTATCATCACAAATGGTAAAGTTCAAAGAAGGTGGTTTTCTTCCTCTAGTATCTGCAATCATCTTCACTATGATAATGGGAATATGGTTTTATGCACAAAAAGAAAGGTACATGTTTGAACTCAACAACAAAGTTTCCTCTGAGAGTGTAATTAAATTGGTAAATGACCTAAACACGAATCGCATCCAAGGAATCGGAGTTTTATATTCTGAGCTTGTACAAGGAATTCCTCCAATATTCGCTCACTTCATTGCCAACATACCAACAATTCATTCAGTTGTTGTATTTGTTTCCCTCAAAGGAATTCCAATCAGCAATGTTGCATTGGAGGAGAGGTTTCTCTTTCGATACGTGGAGCCAAGAGAATGCAAAATGTTCCGTTGCATTGTAAGACATGGTTACAATGATGTAATTGGAGATTCTATGGAGTTTGAGTCACAATTGGTGCAATATCTAAAGGAATTTATAATACAAGAAAGTAATTATATTTCCCAACATGAAACAACAATGTCATCAGGTGTGGTTGAAGGAATTGAAAATGAAATGAAGTCTATAGGTAAGGCATTGGAGAAAGGTGTGGTGTATATGCTAGGGGAAACTGAGATAGTGGCATATCCAAAATCATCAATCTTGCATAAAATTATTGTCGATACATATAATTTTTTGAGAAGGAACTTTCAACAAAGAGATGAGTTAATGGCTATCCCTCGCAAGAGGCTTCTCAAAGTTGGAATGACATATGAAATATAA 2238 0.3628 MSTDKANSTGMEDKSNETIETSDKESNTSPPKLRHRRLNSFDVEAGVSNITGHSSKLSWAATISLAFQSLGVVYGDIGTSPLYVFASTFTNGTIDHSDDILGVLSIIYYTILVFPLLKYCFIVLLANDNGNGGAFALYSLLCRHAKVSLIPNQQPEDMQLSNYKLETLSSNQKLKQKIETNYFTRVLFLFMTILGATMVIGDGIFTPPMSVISAVSGISSKLGQDYVVGITVVILVALFMAQRFGTNKVGFSFAPIITIWFILIGGIGIYDLFKYDVGVLRAINPKYIVDYFQRDGKKAWMSLGGVFLCISGCEAMFADLGHFSVRAIQISFSFITLPAILAAYSGQAAYLRKFPHTVSNIFYECIPGPLYWPTFVIAVIASIIASQAIVSGAFSIVSQALSMGCFPRVKVVHTSASHEGQVYIPAVNYMFLFACVAVTIIFRTAEKLSNAYGFAIICDMTITTFLVSIVMLIVWKKNIWQVALFSIPFGCIELIYLSSQMVKFKEGGFLPLVSAIIFTMIMGIWFYAQKERYMFELNNKVSSESVIKLVNDLNTNRIQGIGVLYSELVQGIPPIFAHFIANIPTIHSVVVFVSLKGIPISNVALEERFLFRYVEPRECKMFRCIVRHGYNDVIGDSMEFESQLVQYLKEFIIQESNYISQHETTMSSGVVEGIENEMKSIGKALEKGVVYMLGETEIVAYPKSSILHKIIVDTYNFLRRNFQQRDELMAIPRKRLLKVGMTYEI* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2179 745 TIGRFAM kup: potassium uptake protein 65 745 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2179 745 MobiDBLite consensus disorder prediction 1 15 - -
Tpr5g2179 745 MobiDBLite consensus disorder prediction 16 33 - -
Tpr5g2179 745 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 660 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2179 745 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 28 665 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2179 745 Pfam K+ potassium transporter 66 632 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2179 745 MobiDBLite consensus disorder prediction 1 33 - -
Tpr5g2179 745 PANTHER POTASSIUM TRANSPORTER 5 28 665 - -
Tpr5g2179 745 PANTHER POTASSIUM TRANSPORTER 5 660 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2179 Tpr-Chr5 42593338 42601242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2179 17 745 Inorganic Solute Cotransporters AT4G13420 52.806 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2179 K03549 - gmx:100814313 928.317