Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2178 ATGGCTACTGATGAAGCAAATTCTATAGGCATGGAGGTAGAAGAGATAACAAAGTGTAATGAAACAATAGAGACAAGCGTCAAAGAGAGAAATACATCGTTTCCGAAGCTTCGCCGTTGCCGTTTAAACTCACTCAATGTGGAAGCCGGAAAAGTTTCCGGCATCACTGATCACTCCTCTGAGTTGAGTTGGATGGCAACTTTATCATTAGCATTTCAAAGCTTGGGAGTTGTATATGGTGATATTGGAACATCTCCACTTTATGTGTTTGCAAGCTCATTCACAAATGGTACTATTGATCATAGTGATGACATTCTTGGGGTCTTATCTATCATATATTATACCATTTTGGTCTTCCCATTGCTCAAATATTGTTTTATTGTACTTTTGGCTAACGACAATGGCAATGGTGGGGCGTTTGCACTATATTCACTACTATGTAGACATGCCAAAGTGAGTTTGATTCCAAATCAACAACCAGAAGACATGCAGCTTTCTAATTACAAACTAGAAACACTTTCTAGTAATCAAAAGTTGAAGCAAAAGCTTGAAAACAATTATTTTGCACGTGTGCTTTTTTTATTTATGACTATTTTGGGAACTACTATGGTTATAGGAGATGGATTTTTCACTCCACCAATGTCAGTTATTTCTGCGGTAAGCGGTATCAGTTCTAAATTAGGTCAAGATTATGTTGTCGGTATCACTATAGTGATATTGGTCTCTCTTTTTATGGTGCAAAGATTTGGTACTGATAAAGTAGGATTTTCATTCGCTCCAATTATAACCATATGGTTTATATTAATTGGAGGAACTGGTCTTTACAACTTGTTCAAATATGATGTTGGGGTATTACGTGCTATTAATCCAAAATATATTGTTAATTACTTTCAACGTGATGGTAAAAAAGCATGGATGTCACTTGGTGGAATATTTTTATGCATCTCAGGATGTGAAGCCATGTTTGCTGACTTGGGTCACTTCAGTGTTCGAGCCATTCAAATTAGTTTCTCTTTTATTACACTTCCAGCAATATTGGCAGCATATAGTGGACAAGCAGCATATCTCCGAAAGTTCCCTAACACTGTATCAAATATTTTTTATGCATGTATACCAGGTCCTTTGTATTGGCCAACATTTGTTATTGCTGTTATTGCCTCCATCATAGCAAGTCAAGCAATAGTTTCAGGAGCATTTTCCATTGCATCTCAAGCTTTAAGTATGGGTTGTTTTCCAAGGGTTAAGGTTGTACATACTTCCGCTACACATGAAGGCCAAGTTTATATTCCTGCAATCAACTATATGTTCATGTTTGCATGTATTGCAGTTACTATTCTCTTCAGAACCTCGGAAAAGCTTAGCAATGCATACGGGGTTGCAATAGTTTGTGATATGACGATCACAACTTTTTTGGTTTCCATTGTAATGTTGATTGTATGGAAGAAAAACATATGGCAAGTAGCTCTATTTTCTATCCCATTTGGTTGCATTGAGTTGTTGTATTTGTCATCACAAATGGTAAAGTTCAAAGAAGGTGGTTTTCTTCCTCTAGTATCTGCAATCATCTTCACTATTGTAATGGGAATATGGTTTTATGCACAAAAAGAAAAATACATGTTTGAACTCAACAACAAAGTTTCCTCTGAGAGTTTAATAAAATTGGTGAATGACCTAAGCACGAATCGCATCCATGGATTCGGAGTTTTATATTCTGAGCTTGTACAAGGAATTCCTCCAATATTCGCTCACTTCATTGCTAACATACCAACAATTCATTCAGTTGTTGTGTTTGTTTCCATGAAAGCAATTCCAATTAGCAATGTTGTATTGGAAGAGAGGTTTCTCTTTCGATACGTGGAGCCAAAAGAATGCAAAATATTCCGTTGCATTGTAAGACATGGTTACAATGATGTAATTGGAAATTATATGGAGTTTGAGTCACAATTGGTGCAATATCTAAAGGAATTTATTATACAAGAAAGTAATTATATGTCCGAGCTTGATTCAATTCAATCACCAGGTGTGGTTGAAGGAATTGAAAATGAGATAAAGTTTATAGATGAGGCATTGGGGAAAGGTGTGGTGTATATGTTAGGGGAAATAGACGTAGTGGCAAATCCAAAATCATCAATTTTGAATAAGATTATTGTTAATACATATACCTTTTTGAGAAGGAACTTTCAACAAAGGGATGAGTTGATGGCTATCCCTCGTAGAAAGCTTCTCAAGGTTGGAATGACATATGAAATATGA 2253 0.3591 MATDEANSIGMEVEEITKCNETIETSVKERNTSFPKLRRCRLNSLNVEAGKVSGITDHSSELSWMATLSLAFQSLGVVYGDIGTSPLYVFASSFTNGTIDHSDDILGVLSIIYYTILVFPLLKYCFIVLLANDNGNGGAFALYSLLCRHAKVSLIPNQQPEDMQLSNYKLETLSSNQKLKQKLENNYFARVLFLFMTILGTTMVIGDGFFTPPMSVISAVSGISSKLGQDYVVGITIVILVSLFMVQRFGTDKVGFSFAPIITIWFILIGGTGLYNLFKYDVGVLRAINPKYIVNYFQRDGKKAWMSLGGIFLCISGCEAMFADLGHFSVRAIQISFSFITLPAILAAYSGQAAYLRKFPNTVSNIFYACIPGPLYWPTFVIAVIASIIASQAIVSGAFSIASQALSMGCFPRVKVVHTSATHEGQVYIPAINYMFMFACIAVTILFRTSEKLSNAYGVAIVCDMTITTFLVSIVMLIVWKKNIWQVALFSIPFGCIELLYLSSQMVKFKEGGFLPLVSAIIFTIVMGIWFYAQKEKYMFELNNKVSSESLIKLVNDLSTNRIHGFGVLYSELVQGIPPIFAHFIANIPTIHSVVVFVSMKAIPISNVVLEERFLFRYVEPKECKIFRCIVRHGYNDVIGNYMEFESQLVQYLKEFIIQESNYMSELDSIQSPGVVEGIENEIKFIDEALGKGVVYMLGEIDVVANPKSSILNKIIVNTYTFLRRNFQQRDELMAIPRRKLLKVGMTYEI* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2178 750 TIGRFAM kup: potassium uptake protein 70 750 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2178 750 PANTHER POTASSIUM TRANSPORTER 5 675 749 - -
Tpr5g2178 750 PANTHER POTASSIUM TRANSPORTER 5 27 665 - -
Tpr5g2178 750 Pfam K+ potassium transporter 71 637 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2178 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 675 749 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2178 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 27 665 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2178 Tpr-Chr5 42578920 42583303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2178 24 750 Inorganic Solute Cotransporters AT4G13420 53.816 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2178 K03549 - gmx:100814313 950.658