Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2173 ATGGACGACGACGACGAGATCCATTCCAATCCATCACCGTTGAGCGGATCTCCGGTGTCATCACCGGGAGCAATTGGTAGGATTTCGGTGACGGTTGCGGCACCGGCGCCGGAATCTCATCCGGTGACGAACAGCTATGCATTAGCGCTACCGATTCAGAATCAGGTAAGAGGAAACAACGGTGGAGGGAGAGAGGATTGTTGGAGCGAAGGCGCAACGGCGGTTTTGATCGAAGCGTGGGGAGAGAGGTATATGGAATTGAGCAGAGGAAATCTGAAGCAAAAGCATTGGAAAGAGGTGGCGGAGATCGTTAACGGAAGAGAAGATTATATGAAAGTGCCGAAAACCGATATTCAGTGCAAAAATCGGATCGATACAGTTAAGAAGAAGTATAAATCGGAGAAAGCTAAGATCGCCGCCGGAGGTGGCGTCACAACCAGTAATTGGCCGTTTTATGACCGATTAGATCAGTTGATTGGACCAACCGCCAAGATCACCGGTAGCACATCTGCCGGTAACAGTAATTTACCACCGCAAAAAGTTCCGTTAGGAATTCCGGTCGGTCTTCATGCCGGTGGTGGTGCTAATCAGTTCAATTCTCAAAAGAAAAATAAAAAACCACAGCCACAAGTACAGCCGCAGTTGAATTACCAGAAGGTTCAACTTCGGCCGCGAGTTGTGGCTGTGGATTCCGATAATTCATCGGAAAGAGAAGCATTATCGCCGGTGTCAAGTGACAGTTTACCACCACCGGATAGTCAGGAGAGGAAGAGAGCGAAGGTGATGAATTCGAATGCTGCTAAAGGAACAGAAGGAAGAAAGAAAGGTTGGGGAAGTGGTGTGAGGGAATTGACTCAAGCAATTGTGAAATTCGGAGAGGCTTATGAACAAGCGGAGACATCGAAGTTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACACAGGTAGAGATTTCACAGCTTAAGCTTGGAAGAAAAAATGTTAATGGCATTGGTAACACAAGCAATCATCATCACAACAACAATGAAAAAAACAACATGAACAACAATAACCATAACAATAATAGTGACAGTGAATGA 1131 0.4615 MDDDDEIHSNPSPLSGSPVSSPGAIGRISVTVAAPAPESHPVTNSYALALPIQNQVRGNNGGGREDCWSEGATAVLIEAWGERYMELSRGNLKQKHWKEVAEIVNGREDYMKVPKTDIQCKNRIDTVKKKYKSEKAKIAAGGGVTTSNWPFYDRLDQLIGPTAKITGSTSAGNSNLPPQKVPLGIPVGLHAGGGANQFNSQKKNKKPQPQVQPQLNYQKVQLRPRVVAVDSDNSSEREALSPVSSDSLPPPDSQERKRAKVMNSNAAKGTEGRKKGWGSGVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKNVNGIGNTSNHHHNNNEKNNMNNNNHNNNSDSE* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2173 376 MobiDBLite consensus disorder prediction 166 278 - -
Tpr5g2173 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 339 IPR044823 -
Tpr5g2173 376 Gene3D - 68 133 - -
Tpr5g2173 376 MobiDBLite consensus disorder prediction 194 219 - -
Tpr5g2173 376 MobiDBLite consensus disorder prediction 345 376 - -
Tpr5g2173 376 MobiDBLite consensus disorder prediction 234 250 - -
Tpr5g2173 376 MobiDBLite consensus disorder prediction 1 22 - -
Tpr5g2173 376 Pfam Myb/SANT-like DNA-binding domain 65 158 IPR044822 -
Tpr5g2173 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2173 Tpr-Chr5 42537514 42539366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2173 1 360 Trihelix Transcription Factor Family AT3G14180 45.861 7.18e-105 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr5g2173 Myb_DNA-bind_4 9.6e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2173 - - cam:101508093 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2173 5 42537514 42539366 Tpr5g2173 5 42537514 42539366 ECH