Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2171 ATGGCTAATGAAGGAAACAAAAGCAATGATTTCTATGCAGTTTTGGGATTGAACAAAGAATGCACTGATTCAGATTTAAGGAATGCTTATAAGAAATTAGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCAGGGAATATGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTATTCTGTTCTATCTGACGCGAATAAGAGGTTAATGTACGACGTTGGAGTTTACGACAGTGATGATGACGAAAATGGTATGGGAGACTTTTTGAATGAAATGGTTACAATGATGAGCCAAACTAAATCAAATGAAAATGGAGAGGAAAGCTTTGAGGAGTTGCAACAGTTGTTCGAAGATATGTTTCAAGCGGACATTGGATTAAATGGAAGCACTTCTCTTAATGGCTCTGGTTGCTCGACTTCATCGACTTTCATGACTTGTAGTGAAAGTTCTAATTCTAATAAACGCAATTCCACTCAGATGAATTATGGAAAAGCAGAGGATTCTTCTAGCTTTGATGTCAATTACCAGAACTTTTGTTTTGGGGCAAAGCACCTTCAAGAAGATGTGGAGAAGGAAAAAGGGGGAATTCAAGAAGGAAGAGGTAGTAGTAGTAGACAAAGAAAAGGCAGAAAGCAAAAGACCTCACATGGCCATCATGTTTCATCTAATGATCATCATGGAATTTCTGCTAATTGA 714 0.3796 MANEGNKSNDFYAVLGLNKECTDSDLRNAYKKLALKWHPDRCSASGNMKFVEEAKKKFQAIQEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFEDMFQADIGLNGSTSLNGSGCSTSSTFMTCSESSNSNKRNSTQMNYGKAEDSSSFDVNYQNFCFGAKHLQEDVEKEKGGIQEGRGSSSRQRKGRKQKTSHGHHVSSNDHHGISAN* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2171 237 Gene3D DnaJ domain 7 136 IPR036869 -
Tpr5g2171 237 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 231 - -
Tpr5g2171 237 Pfam DnaJ domain 10 78 IPR001623 -
Tpr5g2171 237 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Tpr5g2171 237 CDD DnaJ 10 70 IPR001623 -
Tpr5g2171 237 PANTHER PUTATIVE, EXPRESSED-RELATED 1 231 - -
Tpr5g2171 237 SMART dnaj_3 9 73 IPR001623 -
Tpr5g2171 237 MobiDBLite consensus disorder prediction 193 237 - -
Tpr5g2171 237 SUPERFAMILY Chaperone J-domain 7 80 IPR036869 -
Tpr5g2171 237 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Tpr5g2171 237 PRINTS DnaJ domain signature 12 30 IPR001623 -
Tpr5g2171 237 PRINTS DnaJ domain signature 30 45 IPR001623 -
Tpr5g2171 237 PRINTS DnaJ domain signature 53 73 IPR001623 -
Tpr5g2171 237 PRINTS DnaJ domain signature 73 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2171 Tpr-Chr5 42498199 42504646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2171 12 78 C2H2 Transcription Factor Family AT1G74250 40.299 9.61e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2171 - - lang:109338829 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2171 5 42498199 42504646 Tpr5g2171 5 42498199 42504646 ECH