Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2168 ATGGGAGCTAGAGAAAGCAAATTAAGGAAATGGATTAGTGGTGGAAATGGTCACTACAAACGTATACAAGGTCCTATGTTGTTGGCACCAAAAGGTTATGTTCCAATATGTGTTGGAACAAATGAAGACACTTGTAGGAGATTTATGGTTCACACAAGAGCACTTGGTGATGCATTTTTTTGTGAATTGTTGGGTAAGTCTGAGGAGGTATATGGGTTTAGTAATGAAGGGGTTTTGAGGATTCCATTTGAACCACGAGATTTTGAGGAGTGGTTTATTGGAAGGTCCAACACAAAGATTAAAATTAAGAAGAGAATGGTAATACCAACTTGA 333 0.3784 MGARESKLRKWISGGNGHYKRIQGPMLLAPKGYVPICVGTNEDTCRRFMVHTRALGDAFFCELLGKSEEVYGFSNEGVLRIPFEPRDFEEWFIGRSNTKIKIKKRMVIPT* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2168 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 101 IPR003676 GO:0009733
Tpr5g2168 110 PANTHER SMALL AUXIN-UP RNA-RELATED 3 101 - -
Tpr5g2168 110 Pfam Auxin responsive protein 29 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2168 Tpr-Chr5 42469519 42469851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2168 25 90 Calmodulin-binding Proteins AT4G34750 39.394 7.31e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2168 K14488 - gmx:102666083 152.91