Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2166 ATGGCCAAACTTGGAAAATTAACAAAACTAAAATCAGCTATTAAAAGATGGCCATCATTAACCAAACTCAGTCGCAACAACAGCTCTGTCTCTGCCACCTGCAAGAACCAGGAACAAGAACATGACCTTCATGCTGTTTATGTTGGAAAATCGCGTCGGCGTTACCTTGTAAACTCTGAAGTTATTCAACATCCTGTTTTTCAGGAGCTAGTGGACAAGTCTTGTTGTAGTGGTAGTGGTGGTAGTGGTGGTTGTGATGATGGTGTTGTTGTTGTTACTTGTGAGGTTGTTTTGTTTGAACATTTGTTGTGGATGCTTGAAAGTGCTGAAAGTGAAACTGCACAATTGGGGTCAATGGATGAGTTGGTTGAGTTCTACAATTGTGCATGTTGA 393 0.4097 MAKLGKLTKLKSAIKRWPSLTKLSRNNSSVSATCKNQEQEHDLHAVYVGKSRRRYLVNSEVIQHPVFQELVDKSCCSGSGGSGGCDDGVVVVTCEVVLFEHLLWMLESAESETAQLGSMDELVEFYNCAC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2166 130 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 128 - -
Tpr5g2166 130 Coils Coil 20 40 - -
Tpr5g2166 130 Pfam Auxin responsive protein 15 106 IPR003676 GO:0009733
Tpr5g2166 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2166 Tpr-Chr5 42460710 42461411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2166 3 114 Calmodulin-binding Proteins AT4G34750 26.549 6.54e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2166 - - gmx:100797158 167.162