Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g2145 | ATGTGTGGTGGTGCTATTATTTCCGACTTCATTCCAGCTGCGGCGGCGGTGGGTGGTTCCCGCCGTGTCACTGCTGATATCTTGTGGCCAAATTTGAGGAAAACTGGTTCCAAAAAATCATCTTTTTTGCTTGACGATGATTTTGAAGCTGGTTTCAGACAGTTTAAGGATGATTCTGATTTCGATGAAGACGAGGATGAAGATGACGATGAAGGGTTGTTGGTCGGTGTCAAAGGTTTTACCTTTGCTGCTTCTAACAACAAATCTTCAAGGAACTTCTCTCGTGGCTCGGCTGGTGCAAAATCTGTGGCATCGAAATCAAATGAGCAAGCTGAAAAGGAATCGAAGAGAAAGAGGAAGAATCAGTATAGGGGTATCCGCCAACGTCCATGGGGAAAATGGGCAGCTGAGATCCGTGATCCAAGGAAAGGAGTCCGTGTTTGGCTCGGAACTTTCAACACTGCTGAAGAAGCTGCAAGAGCTTACGATGCTGAAGCTAGGAGAATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCCGACGAGGCTCCAAATGCTTCCTCAAAACGTCTGAAGACAAATCCTGATAACCAGCTGTTGAACAAAAATCTGAACTCTTTCAAGCCGAAGGGAAACAACAAAATGTTCAATTTCAGCGAGAATATGGAGAACTTCTATTCTCCTATGGATCAGGTTGAACAGAAACCATTGGTTAACAACCAATATGGTGCTGCTGACATCGGAGCCTTCGCTGGAAACGGAGTTCACCTTGCACCTGCTGATGTTAATGCTTATTTCAGTTCTGAGCATTCAAGCAACTCGTTTGATTATTCTGATTTATGTTGGGGGGAACAAGGCCCGAAAACCCCTGAGATTTCCTCGGTGTTTTCTGCTCCTCTCGAAGCTGAACCTCAGATGAACATGCAGTCTAACAACTCTCAGGATATGCTACCTATGCAAGCTGAATCTGCAAAGACACTCTCTGAGGAGCTTGCAGATATCGAATCCCAGCTGAAGTTCTTCGAGAACTCATTCGATGATAACTGGAGTGATGCTTCACTTGCGTCTTTGCTCGGTGCTGATGTAACTCAGGATGCTGGAAACACAATGAACCTTTGGAGCTTTGATGACCTGCCTTCCATCGCAGGCGGAGTTTTCTGA | 1158 | 0.4577 | MCGGAIISDFIPAAAAVGGSRRVTADILWPNLRKTGSKKSSFLLDDDFEAGFRQFKDDSDFDEDEDEDDDEGLLVGVKGFTFAASNNKSSRNFSRGSAGAKSVASKSNEQAEKESKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEAPNASSKRLKTNPDNQLLNKNLNSFKPKGNNKMFNFSENMENFYSPMDQVEQKPLVNNQYGAADIGAFAGNGVHLAPADVNAYFSSEHSSNSFDYSDLCWGEQGPKTPEISSVFSAPLEAEPQMNMQSNNSQDMLPMQAESAKTLSEELADIESQLKFFENSFDDNWSDASLASLLGADVTQDAGNTMNLWSFDDLPSIAGGVF* | 386 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g2145 | 385 | MobiDBLite | consensus disorder prediction | 91 | 126 | - | - | |
Tpr5g2145 | 385 | CDD | AP2 | 122 | 180 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | PANTHER | DNA-BINDING DOMAIN | 1 | 379 | IPR044808 | GO:0003700|GO:0009873 | |
Tpr5g2145 | 385 | PANTHER | EREBP TRANSCRIPTION FACTOR | 1 | 379 | - | - | |
Tpr5g2145 | 385 | SMART | rav1_2 | 122 | 185 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | PRINTS | Ethylene responsive element binding protein signature | 123 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | PRINTS | Ethylene responsive element binding protein signature | 145 | 161 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | ProSiteProfiles | AP2/ERF domain profile. | 122 | 179 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | Gene3D | AP2/ERF domain | 121 | 180 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | Coils | Coil | 323 | 343 | - | - | |
Tpr5g2145 | 385 | Pfam | AP2 domain | 122 | 171 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr5g2145 | 385 | MobiDBLite | consensus disorder prediction | 91 | 106 | - | - | |
Tpr5g2145 | 385 | SUPERFAMILY | DNA-binding domain | 122 | 181 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g2145 | Tpr-Chr5 | 42244613 | 42247450 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g2145 | 1 | 385 | AP2-EREBP Transcription Factor Family | AT3G14230 | 42.716 | 2.63e-68 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Tpr5g2145 | AP2 | 2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g2145 | K09286 | - | gmx:100818646 | 457.218 |