Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2136 ATGGAAAGTGAAGCTCCAACAATGGAGAATAATCCTAAAATTTCAGCCTATTACCAAACGAGGTTAGCGCACTTCGGCGTCGTCAGTACAGAGTGGTTAGCTCAGGCTCAATCCGCAACAAACCCTCTTCTATCATCATCAACCGATTCAGATACTGATAAAGATACCAATTTCTCTGTAATCGATGAATTCAACCGGTGGCGTAGTCATCCCGATTTGGCCGAAGCTGTTGCCGCAATTCGTGCCCTTGCTGCTGTTATCAGCTCTAGCAAAGCTTCTACTATGATGCAACTCGAAATTGAACTCAAAAATGCCTCTGATACTCTTAAAGCATGGGATACAACCTCTATCTCATTGACAGCGGCATCTGATCTGTTTATGAGATACGTGACAAGGACCTCTGCTTTAGAATTTGAAGACTTCAACTCTGCTAAATCTCGCTTGATTGAGCGTGCTGACAAGTTTGGGGAAATTTCCTACAAGGCTCGCAAAATTATTGCAATGCTTAGTCAAGATTTTATATTTGATGGTTGTACCATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTTCTTAAACTGGCTGCACATAATAAGAAACGCTTTCGGGTCTTCTGCACAGAGGGGAGACCAGACCGAACAGGTTTAAGGTTGTCCCATGAGCTGGCCAAGCTCGATGTTCCTGTGAAACTGGTGATAGACTCTGCAGTGGCTTATACTATGGATGAGGTAGACATGGTAATTGTGGGGGCAGACGGAGTTGTTGAAAGTGGTGGTATAATTAACATGATGGGGACATATCAAATTGCATTGGTTGCAAAGAGTATGAATAAGCCAGTCTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCATTACCCTCTGGACCAAAAGGATTTGGTGCCGGCCATACGACCAGTTGATTTTGGTGTACCTATTCCATTGAAGGTTGACGTTGAATGCTCCGCCCGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAGCTCATCCAGCTATACTTATAA 1074 0.433 MESEAPTMENNPKISAYYQTRLAHFGVVSTEWLAQAQSATNPLLSSSTDSDTDKDTNFSVIDEFNRWRSHPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDTLKAWDTTSISLTAASDLFMRYVTRTSALEFEDFNSAKSRLIERADKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAHNKKRFRVFCTEGRPDRTGLRLSHELAKLDVPVKLVIDSAVAYTMDEVDMVIVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARHYPLDQKDLVPAIRPVDFGVPIPLKVDVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2136 357 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 12 357 - -
Tpr5g2136 357 Coils Coil 95 115 - -
Tpr5g2136 357 Gene3D - 55 158 IPR042528 -
Tpr5g2136 357 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 12 357 - -
Tpr5g2136 357 Pfam Initiation factor 2 subunit family 71 345 IPR000649 GO:0044237
Tpr5g2136 357 Gene3D - 161 357 IPR042529 -
Tpr5g2136 357 SUPERFAMILY NagB/RpiA/CoA transferase-like 72 356 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2136 Tpr-Chr5 42122286 42126132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2136 11 357 Eukaryotic Initiation Factors Gene Family AT1G53880 79.037 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2136 K03239 - gmx:102669842 568.54