Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2128 ATGGATACTATGAAATCTTTCAAAGGTTACGGCAAAGTAGACGAAATAGAACAACAAGCATTTAAAAAAAAGACACGTAAGCGCATCACAATCATAATAATCTCCACCGTTATTCTATTAGCGGTTATAATTGCTGCGGTTGCAGGAATCCTCATACACAAGCGCAACACCTCATCATCCTCTTCCTCTGACTCGCTCCCAAAAACTCAGTTAACACCCGCCACTTCACTCAAAGCAGTTTGCGAGGCAACTCAGTACCCTAACTCGTGCTTCTCCGCAATCTCATCTCTTCCAGATTCCAACACTACCGATCCTGAACAACTCTTCAAACTCTCTCTCAAAGTCGCCATTGATGAACTCTCAAATCTCACGCGCGGTTTCAGTGATAAAATCAAAGCGAGTGGTGACACGCGCCTTAAGAAAGCGATTGAAGTTTGCGGTTCGGTTTTGAACGATTCGTTAGATCGGCTTAACGATTCAATGTCGACGATTGTTTCCGGTGAGAAGATTCTTTCTCCGACGAAGATTCGTGATGTTGAGACGTGGATTAGTGCGGCGATAACGGATCATGACACGTGTTTAGATGCCGTTGGTGAATTGAACTCAACCGCTGCGAAAAATATTCGTAGTGAAATTGAAACGGCGATGAGAAACTCGACGGAGTTTGCTAGTAACAGTTTAGCGATTGTGACGAAGGTGATTAGACTCTTATCGAATTTCGAGGTTTCGAATCATCACCGGAGATTGCTCGGAGATTTTCCGGAGTGGTTAGGAGCGGCGGAGAGGAGGTTGCTTGCGGCGGCGGAAGGGAATGGGACTACGGTGATACCGGATACGCCGGATGCGGTTGTGGCGAAGGATGGAAGTGGACAGTATAAGACGATTGGGGAGGCGTTGAAGATTGTACCGAAGAAGAGTTTGAAGAGATTTGTGGTGTATGTGAAGAAAGGAGAATATGTAGAGAATATTGATTTGGATAAGAATACATGGAATGTGATGATTTACGGCGACGGTATGACGGAAACCGTCGTAAGTGGTAGCCGGAATTTCATGGATGGCACACCTACGTTTGAAACTGCAACTTTTGCTGTTAAAGGTAAGGGATTCATTGCTAAAGACATACAATTCAAGAACACAGCAGGTGCATCTAAGCACCAGGCTGTGGCATTACGATCAGGCTCGGATGAATCTGTGTTCTATAGGTGTTCATTTGTGGGATTTCAGGATACCCTTTATGCACATTCAAACCGTCAATTCTACCGCGACTGTGACATTACAGGTACAATAGACTTCATATTCGGAAACGCAGCTGTTGTGTTCCAAAATTGCAAAATCATGCCTAGGCAACCAATGGCAAACCAGTTCAACACCATCACAGCTCAGGGTAAGAAGGATCCTAATCAAAACACTGGAATTGTGATCCAGAAATCAACTATCACTACACTACCTAATGATAATCTCATAGCACCTACTTACCTTGGTAGACCATGGAAAGATTTCTCCACTACTATTATCATGAAATCACAGATTGGATCATTCTTGAAACCAGTAGGGTGGATAAGTTGGGTTTTCAATGTGGATCCTCCAAGTAGCATCCTCTATGCCGAATACCAGAACACTGGGCCAGGAGCAGCAGTAGACCAGAGAGTCAAATGGGCCGGTTATAAGTCCGCTCTCGAAGACGGAGAAGCTCTGAAGTTCACTGTGGATTCCTTTATCCAGGGTCCGGAGTGGTTGCCAAATGCTGCTGTGCAGTTTGATTCTACCTTGTAA 1773 0.4467 MDTMKSFKGYGKVDEIEQQAFKKKTRKRITIIIISTVILLAVIIAAVAGILIHKRNTSSSSSSDSLPKTQLTPATSLKAVCEATQYPNSCFSAISSLPDSNTTDPEQLFKLSLKVAIDELSNLTRGFSDKIKASGDTRLKKAIEVCGSVLNDSLDRLNDSMSTIVSGEKILSPTKIRDVETWISAAITDHDTCLDAVGELNSTAAKNIRSEIETAMRNSTEFASNSLAIVTKVIRLLSNFEVSNHHRRLLGDFPEWLGAAERRLLAAAEGNGTTVIPDTPDAVVAKDGSGQYKTIGEALKIVPKKSLKRFVVYVKKGEYVENIDLDKNTWNVMIYGDGMTETVVSGSRNFMDGTPTFETATFAVKGKGFIAKDIQFKNTAGASKHQAVALRSGSDESVFYRCSFVGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCKIMPRQPMANQFNTITAQGKKDPNQNTGIVIQKSTITTLPNDNLIAPTYLGRPWKDFSTTIIMKSQIGSFLKPVGWISWVFNVDPPSSILYAEYQNTGPGAAVDQRVKWAGYKSALEDGEALKFTVDSFIQGPEWLPNAAVQFDSTL* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2128 590 PANTHER PECTINESTERASE 8 587 - -
Tpr5g2128 590 Gene3D - 278 590 IPR012334 -
Tpr5g2128 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 233 IPR035513 -
Tpr5g2128 590 ProSitePatterns Pectinesterase signature 2. 425 434 IPR033131 -
Tpr5g2128 590 Pfam Pectinesterase 281 575 IPR000070 GO:0030599|GO:0042545
Tpr5g2128 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 233 IPR035513 -
Tpr5g2128 590 SUPERFAMILY Pectin lyase-like 280 587 IPR011050 -
Tpr5g2128 590 SMART PMEI_2 72 229 IPR006501 GO:0004857
Tpr5g2128 590 PANTHER PECTINESTERASE 1-RELATED 8 587 - -
Tpr5g2128 590 Pfam Plant invertase/pectin methylesterase inhibitor 77 229 IPR006501 GO:0004857
Tpr5g2128 590 CDD PMEI-like_3 79 232 - -
Tpr5g2128 590 TIGRFAM PME_inhib: pectinesterase inhibitor domain 61 232 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2128 Tpr-Chr5 42039168 42043143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2128 1 584 Carbohydrate Esterase AT1G53840 58.472 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2128 - - gmx:100784642 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2128 5 42039168 42043143 Tpr5g2128 5 42039168 42043143 ECH