Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2103 ATGGCTAATGAAGGAAACAAAAGCAATGATTTCTATGCAGTTTTGGGATTGAACAAAGAATGCACTGATTCAGATTTAAGGAATGCTTATAAGAAATTAGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCAGGGAATATGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTATTCTGTTCTATCTGACGCGAATAAGAGGTTAATGTACGACGTTGGAGTTTACGACAGTGATGATGACGAAAATGGTATGGGAGACTTTTTGAATGAAATGGTTACAATGATGAGCCAAACTAAATCAAATGAAAATGGAGAGGAAAGCTTTGAGGAGTTGCAACAGTTGTTCGAAGATATGTTTCAAGCGGACATTGGATTAAATGGAAGCACTTCTCTTAATGGCTCTGGTTGCTCGACTTCATCGACTTTCATGACTTGTAGTGAAAGTTCTAATTCTAATAAACGCAATTCCACTCAGATGAATTATGGAAAAGCAGAGGATTCTTCTAGCTTTGATGTCAATTACCAGAACTTTTGTTTTGGGGCAAAGCACCTTCAAGAAGATGTGGAGAAGGAAAAAGGGGGAATTCAAGAAGGAAGAGGTAGTAGTAGTAGACAAAGAAAAGGCAGAAAGCAAAAGACCTCACATGGCCATGATGTTTCATCTAATGATCATCATGGAATTTCTGCTAATTGA 714 0.3796 MANEGNKSNDFYAVLGLNKECTDSDLRNAYKKLALKWHPDRCSASGNMKFVEEAKKKFQAIQEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFEDMFQADIGLNGSTSLNGSGCSTSSTFMTCSESSNSNKRNSTQMNYGKAEDSSSFDVNYQNFCFGAKHLQEDVEKEKGGIQEGRGSSSRQRKGRKQKTSHGHDVSSNDHHGISAN* 238
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2103 237 MobiDBLite consensus disorder prediction 192 237 - -
Tpr5g2103 237 Gene3D DnaJ domain 7 136 IPR036869 -
Tpr5g2103 237 Pfam DnaJ domain 10 78 IPR001623 -
Tpr5g2103 237 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Tpr5g2103 237 MobiDBLite consensus disorder prediction 149 173 - -
Tpr5g2103 237 CDD DnaJ 10 70 IPR001623 -
Tpr5g2103 237 SMART dnaj_3 9 73 IPR001623 -
Tpr5g2103 237 PANTHER PUTATIVE, EXPRESSED-RELATED 1 231 - -
Tpr5g2103 237 SUPERFAMILY Chaperone J-domain 7 80 IPR036869 -
Tpr5g2103 237 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Tpr5g2103 237 PRINTS DnaJ domain signature 12 30 IPR001623 -
Tpr5g2103 237 PRINTS DnaJ domain signature 30 45 IPR001623 -
Tpr5g2103 237 PRINTS DnaJ domain signature 53 73 IPR001623 -
Tpr5g2103 237 PRINTS DnaJ domain signature 73 92 IPR001623 -
Tpr5g2103 237 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 231 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr5g2103 Tpr-Chr5 41680644 41689060 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2103 12 78 C2H2 Transcription Factor Family AT1G74250 40.299 8.76e-11 59.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2103 - - lang:109338829 350.517