Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g2103 | ATGGCTAATGAAGGAAACAAAAGCAATGATTTCTATGCAGTTTTGGGATTGAACAAAGAATGCACTGATTCAGATTTAAGGAATGCTTATAAGAAATTAGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCAGGGAATATGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTATTCTGTTCTATCTGACGCGAATAAGAGGTTAATGTACGACGTTGGAGTTTACGACAGTGATGATGACGAAAATGGTATGGGAGACTTTTTGAATGAAATGGTTACAATGATGAGCCAAACTAAATCAAATGAAAATGGAGAGGAAAGCTTTGAGGAGTTGCAACAGTTGTTCGAAGATATGTTTCAAGCGGACATTGGATTAAATGGAAGCACTTCTCTTAATGGCTCTGGTTGCTCGACTTCATCGACTTTCATGACTTGTAGTGAAAGTTCTAATTCTAATAAACGCAATTCCACTCAGATGAATTATGGAAAAGCAGAGGATTCTTCTAGCTTTGATGTCAATTACCAGAACTTTTGTTTTGGGGCAAAGCACCTTCAAGAAGATGTGGAGAAGGAAAAAGGGGGAATTCAAGAAGGAAGAGGTAGTAGTAGTAGACAAAGAAAAGGCAGAAAGCAAAAGACCTCACATGGCCATGATGTTTCATCTAATGATCATCATGGAATTTCTGCTAATTGA | 714 | 0.3796 | MANEGNKSNDFYAVLGLNKECTDSDLRNAYKKLALKWHPDRCSASGNMKFVEEAKKKFQAIQEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFEDMFQADIGLNGSTSLNGSGCSTSSTFMTCSESSNSNKRNSTQMNYGKAEDSSSFDVNYQNFCFGAKHLQEDVEKEKGGIQEGRGSSSRQRKGRKQKTSHGHDVSSNDHHGISAN* | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g2103 | 237 | MobiDBLite | consensus disorder prediction | 192 | 237 | - | - | |
Tpr5g2103 | 237 | Gene3D | DnaJ domain | 7 | 136 | IPR036869 | - | |
Tpr5g2103 | 237 | Pfam | DnaJ domain | 10 | 78 | IPR001623 | - | |
Tpr5g2103 | 237 | ProSiteProfiles | dnaJ domain profile. | 10 | 81 | IPR001623 | - | |
Tpr5g2103 | 237 | MobiDBLite | consensus disorder prediction | 149 | 173 | - | - | |
Tpr5g2103 | 237 | CDD | DnaJ | 10 | 70 | IPR001623 | - | |
Tpr5g2103 | 237 | SMART | dnaj_3 | 9 | 73 | IPR001623 | - | |
Tpr5g2103 | 237 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 1 | 231 | - | - | |
Tpr5g2103 | 237 | SUPERFAMILY | Chaperone J-domain | 7 | 80 | IPR036869 | - | |
Tpr5g2103 | 237 | ProSitePatterns | Nt-dnaJ domain signature. | 58 | 77 | IPR018253 | - | |
Tpr5g2103 | 237 | PRINTS | DnaJ domain signature | 12 | 30 | IPR001623 | - | |
Tpr5g2103 | 237 | PRINTS | DnaJ domain signature | 30 | 45 | IPR001623 | - | |
Tpr5g2103 | 237 | PRINTS | DnaJ domain signature | 53 | 73 | IPR001623 | - | |
Tpr5g2103 | 237 | PRINTS | DnaJ domain signature | 73 | 92 | IPR001623 | - | |
Tpr5g2103 | 237 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 1 | 231 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g2103 | Tpr-Chr5 | 41680644 | 41689060 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g2103 | 12 | 78 | C2H2 Transcription Factor Family | AT1G74250 | 40.299 | 8.76e-11 | 59.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g2103 | - | - | lang:109338829 | 350.517 |