Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2101 ATGGGAGCTAGAGAAAGCAAATTAAGGAAATGGATTAGTGGTGGAAATGGTCACTACAAACGTATACAAGGTCCTATGTTGTTGGCACCAAAAGGTTATGTTCCAATATGTGTTGGAACAAATGAAGACACTTGTAGGAGATTTATGGTTCACACAAGAGCACTTGGTGATGCATTTTTTTGTGAATTGTTGGGTAAGTCTGAGGAGGTATATGGGTTTAGTAATGAAGGGGTTTTGAGGATTCCATTTGAACCACAAGATTTTGAGGAGTGGTTTATTGGAAGGTCCAACACAAAGATTAAAATTAAGAAGAGAATGGTAATACCAACTTGA 333 0.3754 MGARESKLRKWISGGNGHYKRIQGPMLLAPKGYVPICVGTNEDTCRRFMVHTRALGDAFFCELLGKSEEVYGFSNEGVLRIPFEPQDFEEWFIGRSNTKIKIKKRMVIPT* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2101 110 PANTHER SMALL AUXIN-UP RNA-RELATED 3 101 - -
Tpr5g2101 110 Pfam Auxin responsive protein 29 90 IPR003676 GO:0009733
Tpr5g2101 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2101 Tpr-Chr5 41663672 41664004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2101 25 90 Calmodulin-binding Proteins AT4G34750 39.394 4.66e-09 49.3