Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2095 ATGGATGAAGTTGTTAGAACTTTGGAGAAGCTGCAAGTTCCTAATTTGAATGTAGGCAATCTAAAGCATGCTGATGGACAATCTCCAAACTTGCTGGCTATTGATGAAAAACGTTGGCCAAGATTTTTTTTCTGTCATCATTATGCGAAACAAAGTCCGGTGTTTATGGCTGTTGCTTTTTATATATGTGCAAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAAGCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGGGTAGCTAAAGAAAAGAAAGATCCTAAAGAAGTTAAGACCAATAGAGATTTGCTTGATGTCTTACCAAGCAAAAGAAAAGCTGAGGACGGTGGCTATTTGTCTATGATGGAGCAGAGACATCCTATTCTTGATAGCAAAGATTGA 453 0.3687 MDEVVRTLEKLQVPNLNVGNLKHADGQSPNLLAIDEKRWPRFFFCHHYAKQSPVFMAVAFYICAKKHKLKVDKIKLIELCGTSEAEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRDLLDVLPSKRKAEDGGYLSMMEQRHPILDSKD* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2095 150 PANTHER BNAC05G50940D PROTEIN 52 139 - -
Tpr5g2095 150 Gene3D - 44 101 - -
Tpr5g2095 150 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 52 139 IPR020529 GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2095 Tpr-Chr5 41603060 41605657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2095 53 137 Core DNA Replication Machinery Family AT1G26840 72.941 1.83e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2095 K02608 - gmx:100777539 156.377