Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2062 ATGTCGGTGGATCCATGGCTGATGCTGATGTTGATGTTCATCAGCAGCACTTGTACTCTTGTCATCAATGGTGACACAGATCCAAATGATGTCTCTACTTTAATGTCTTTGTTTCAAAGCATGAACTCACCGTCCCAGCTAAATTGGCCGGCCAATGGCAATGATCCTTGTGGACAATCTTGGACAGGCATCACTTGCTCAGGCAACCGAATCACCGAAATTAAGTTACCTGGTCGTGGAATATCCGGAACTTTGAGTTACAATCTACAATCCCTGACAGCTCTGACCAACCTAGATTTGAGTAACAACAATCTTGGTGGCACTATACCGTACTCGTTTCCTCAACAAACATTGCAGCACTTAAATCTTGCTAATAATAATTTCAATGGAGGGATACCTTATGTTTTTTCTGATATTCCTTCTCTTATAAGCCTGAATCTTGGTCACAATCAACTCAACCAAGGACTGTCTATGAGCTTTCAAAAGCTTACTTCCCTTACTACATTGGACGTTTCTTCCAATTCTTTTACTGGAGAGCTCCCTCAGACTATGAACGCACTATCAAGCATAAACACCATGAATCTACAAAACAACCAATTTACAGGAACCATCAATATCCTTGCTGATCTTCCTCTTCAAAATTTGAATATCGAAAACAATCATTTTACCGGCTGGATACCAGAACAGTTGAAAAACATAAACCTACGAAAGAATGGTAATTCGTGGAGCTCTGGACCTGCACCCCCACCTCCTCCTGGTACACCTCCAATAAACAAAAACAATGGTAATCACAAGTCTGGTGAACCTAAAACCTCGTCAGGTTCTGGTTCAAGTGACGGAAGCAAAAAATCCGGTATAGGAGGTGGTGCCATTGCTGGAATAGTGATCTCGATCTTAGTTGTTGGCGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAGAAGTCGTCTGGAGATGTGGAAAAGCTAGACAATCGACCCTTGGCTCCTCATACTTCAAATGAAGTGCATGAAATGAATTCAACGCAAACTTCTTCTGTAATTGACTTGAAGACATTTGATACTTCTGCGGCCTCAATAAATCTTAAACCCCCTCCTCATAAATCGTTTGATGAAGACGAGTCTCCAAAGAAGCCCGCTGTTGTCAAGAAGACCGTAGCACCTCCTGCAAATCTGAAATCATATTCTATTGCTGACCTACAGATTGCTACGGGAAGCTTCAGTGTTGATCAACTTCTCGGCGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCTAATAATTTGTCTGAAGATTTTATGGAGATAGTTTCTAATCTTTCCCATTTGCATCATCCGAATGTGACGGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTCTTAGTCTATGAGTTTCACAAAAATGGATCACTGCATGAATTCCTTCACCTCCCTGATGAGTTCATTAAACCGTTGATATGGAATTCACGTGTCAAGATTGCTTTGGGAATTGCACGCGCTTTAGAGTACCTACATGAAGTTTGTTCGCCATCAATTGTTCATAAGAATATAAAGGCAGCCAACATATTGCTTGATACTGATCTTAATCCTCATCTAGACAGTGGATTGGCCAGCTATATTCCAAATGCAAACCAGGTATTGAACAATAATGCTGGATCTGGATACGAGGCTCCAGAAGTCGGGATGTCTGGTCAGTATACTCTTAAGAGTGATGTCTATAGCTTTGGAGTTGTCATGTTGGAGCTTCTAAGTGGACGCAAACCATTTGATAGTTCAAGATCAAGATTTGAGCAGTCGTTGGTTCGATGGGCGACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGACTATACCCTGTCAAGTCCCTTTCTCGATTCGCTGATGTCATTGCTCTTTGTGTTCAGCCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTAGTTCGGTTAGTGCAACGAACCAACATGAGCAAACGTACATTTGGAACTGATCAAGGAGGATCCAACCGAGGAGGTGATGACCAAGACACCCTAGACATGTAA 2139 0.4222 MSVDPWLMLMLMFISSTCTLVINGDTDPNDVSTLMSLFQSMNSPSQLNWPANGNDPCGQSWTGITCSGNRITEIKLPGRGISGTLSYNLQSLTALTNLDLSNNNLGGTIPYSFPQQTLQHLNLANNNFNGGIPYVFSDIPSLISLNLGHNQLNQGLSMSFQKLTSLTTLDVSSNSFTGELPQTMNALSSINTMNLQNNQFTGTINILADLPLQNLNIENNHFTGWIPEQLKNINLRKNGNSWSSGPAPPPPPGTPPINKNNGNHKSGEPKTSSGSGSSDGSKKSGIGGGAIAGIVISILVVGAIVAFFLVKKRSKKSSGDVEKLDNRPLAPHTSNEVHEMNSTQTSSVIDLKTFDTSAASINLKPPPHKSFDEDESPKKPAVVKKTVAPPANLKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNNLSEDFMEIVSNLSHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHEFLHLPDEFIKPLIWNSRVKIALGIARALEYLHEVCSPSIVHKNIKAANILLDTDLNPHLDSGLASYIPNANQVLNNNAGSGYEAPEVGMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDQDTLDM* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2062 712 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524
Tpr5g2062 712 Pfam Leucine rich repeat 94 152 IPR001611 GO:0005515
Tpr5g2062 712 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 16 709 - -
Tpr5g2062 712 ProSiteProfiles Protein kinase domain profile. 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2062 712 SUPERFAMILY L domain-like 26 232 - -
Tpr5g2062 712 PRINTS Leucine-rich repeat signature 95 108 - -
Tpr5g2062 712 PRINTS Leucine-rich repeat signature 163 176 - -
Tpr5g2062 712 MobiDBLite consensus disorder prediction 317 345 - -
Tpr5g2062 712 Gene3D Transferase(Phosphotransferase) domain 1 487 700 - -
Tpr5g2062 712 MobiDBLite consensus disorder prediction 367 381 - -
Tpr5g2062 712 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Tpr5g2062 712 Gene3D Ribonuclease Inhibitor 27 255 IPR032675 -
Tpr5g2062 712 SMART LRR_typ_2 139 162 IPR003591 -
Tpr5g2062 712 SMART LRR_typ_2 92 120 IPR003591 -
Tpr5g2062 712 SMART LRR_typ_2 163 187 IPR003591 -
Tpr5g2062 712 MobiDBLite consensus disorder prediction 690 712 - -
Tpr5g2062 712 MobiDBLite consensus disorder prediction 362 382 - -
Tpr5g2062 712 Pfam Protein tyrosine and serine/threonine kinase 410 679 IPR001245 GO:0004672|GO:0006468
Tpr5g2062 712 Gene3D Phosphorylase Kinase; domain 1 372 485 - -
Tpr5g2062 712 SUPERFAMILY Protein kinase-like (PK-like) 390 679 IPR011009 -
Tpr5g2062 712 MobiDBLite consensus disorder prediction 690 704 - -
Tpr5g2062 712 PANTHER OS01G0253100 PROTEIN 16 709 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2062 Tpr-Chr5 41152046 41158433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2062 22 711 Strubbelig Receptor Gene Family AT1G53730 66.524 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr5g2062 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2062 - - gmx:100780323 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2062 5 41152046 41158433 Tpr5g2062 5 41152046 41158433 ECH