Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2057 ATGGTCAATGGATGGTCATGCTCTCACCCCGTGCCTCCCCCAAAAATCTTTTCCCTCATTGGTTCATCTCTTCCTTATTCTTCCCTTCTTCATTCTTCTTCTTCCTTCTTCACTCCAACCCTCAAATTCATTCATTCAAACTTCAACTTAACTTCTTCTAGCATGAGATCAAACCCTCTATCAACTTCATCACAATTACCCTTTTACCCTTCTTCCAACAATTACATGTTTTTCTCCAAACTTATGTTCCTTTTCATAACAAAAACCTTATTTTTATCCTTATTTTTTGTTCATGTCTTTTCTACTTGTAACCAACTAGACAAAGATTCTCTCTTGTCTTTCTCTTCAAAAATCTTAACTTTTTCACCTCACCCATCTCTTAATTGGTCTTCTTCATCTGATTGTTGTAATTGGGAAGGTATAATCTGTGATCAAAATAATCACCATGTTAAACAAATTTTGTTACATAATAGAGGTCTTAATGGTTTCATTGAGTTTTCTTTTATTACTTCACTTCAATCACTTTCTCATGTTAATCTTTCACATAATAAACTTCATGGTAATCTTCAAAATCAGTTTTTTTCACTTGTTAATCATGTATTAGTACTTGATTTGAGTTATAATCATTTCTATGGTGGATTACCTAGTAGTAATGGTAGTGGAAATGGAAATGGAAATAACAGTGTTATTCAGGAATTAGATTTGTCTAGTAATTCATTCAATGGAACATTACCAGTTTCTTTGATTCAGATTCTTGCTGCAAAAGGGAATTTGATTTCTTTCAATGTTAGTAACAACACTTTCACAGGTCATATTCCAATTTCAAGCTTTTGTATTAATAATTCTGCTATAAGATTCTTGGATTTTTCATCCAATGATTTTGCTGGTGTTATTGATACTGGTTTAGGAGCATGTTCTAAGCTTGAGAGATTTAGAGCAGGTTTCAATTTTCTAACAGGGAATATACCGGTTGATATTTATGATGCTGTTTCACTAACAGAAATATCATTGCCACTTAATAGAATTAATGGAACAATTGATGATGGAATTGTTAACCTTGCAAATCTCACAGTTTTGGAGCTTTATTCGAATAATTTAACAGGTTCTATTCCTAAGGAAATTGGTAAACTTTCCAAATTGGAAAGGTTACTTCTTCATGTCAACAATTTGACAGGTTCAATTCCATCATCTTTGATGAATTGTCACAATCTTGTTGTGTTGAATTTAAGGGTCAATGATTTGGAAGGAAATCTTTCGGCGTTCAATTTCTCAGGACTTGGTAGACTTGTTACGCTTGATCTTGGTAACAATAGGTTTAGCGGTGTTTTACCGTCGAGCCTTTATGATTGTAAGTCACTTGCTGCATTAAGGCTTGCATCTAATAATCTTGTGGGACAGGTTTCATCTGAGATACTTGGACTTGAGTCTCTTTCGTTCTTATCGATTTCTACAAACATGTTGAAGAATATCACTGGTGCTCTAAGAATACTCACTGGCCTCAAGAAGCTTAGTACCCTTATGCTCTCCAAGAATTTTTACAATGAAACGTTACCGAATGATGAGAACTTGATAGGCCCTGATGGATTCCAAAAGATCCAAGTTTTAGGGTTAGGGGGTTGTAATTTCACAGGTCAAATACCAAGTTGGCTTAGAAAGCTGAAGAAGCTTGAGGCCGTGGACCTGTCCTATAATCTTTTAAGTGGTTCGATTCCTCCTTGGTTAGGTACACTTTCTGAACTTTTCTACATAGACCTGTCTGTTAACCTACTTACAGGCCCGTTTCCGATAGAACTTACGAAACTCCCGGCACTAGCATCACAACAAGCAAATGATAAAGTACAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCTAACAATGTTTCTTTGTTGCAATACAATCAACTTTCAAGCCTTCCACCGGCAATTTATCTCGGAACCAATCACCTTAATGGCAGCATCCCGGTTGAGGTTGGCCAATTGAAAGTTCTTCATACGCTGGACCTGAACTTAAACAACTTCTCTGGCAATATACCGGATCAATTTTCAAACTTGAAGAACTTAGAGACGCTAGACCTCTCGGGAAATCAACTATCAGGCGGAATTCCTGCTTCGCTCAATAATTTACATTTCTTGTCATTTTTCAGTGTAGCAAACAATAATCTTCAAGGTCAGATACCAACAGGTGGTCAGTTTAATACTTTTTCCAACTCCAGCTTTGAAGGAAATCCGCAATTGTGCGGTTCGGTTATTCAGCGCCCTTGTTCTTCTCAAAGAAATGCTACTAGTACTTCAGCTAGTGGCAAATCCAGCAAAAAAATAATAGTCACACTTATTATTGTTGTCAGTTTCGGCATAGCTACTATGGTAACATTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAAGAGGAGATTCTGATAAGATTGAACTCGAATCAATTTCTCCGTACTCAAACAGCGGCGTTCATCCTGAGGTTGACAGAGAGGCTAGCCTAGTGGTATTGTTCCCCAACAAAAACAATGATACCAAGGATCTTTGCATATTAGAGATCATAAAAGCAACTGAAAATTTCAGCCAGGCAAATATAGTAGGATGTGGCGGTTTCGGTTTGGTTTATAAAGCAACCTTTCAAAATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGCCTTATGGAAAGGGAATTTAAAGCTGAAGTTGAGGCTTTGTCAACAGCACAACATGAGAATCTGGTAGCATTGCAAGGCTACTGCGTGCATGATGGTTATCGACTACTCATATATAATTACATGGAGAATGGAAGTCTCGATTACTGGTTGCATGAAAAGCCCGACGGTTCGTCTCAACTCGATTGGCCGACTCGTTTGAAGATTGCACAAGGAGCAAGTTGTGGTTTGGCCTATTTGCACATGACATGTGAACCGCACATTGTACACCGTGACATAAAATCAAGTAATATACTGCTTAACGAGAAGTTTGAGGCACATGTTGCTGATTTTGGGTTGTCGCGATTGATTCTTCCGTATGAAACCCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCTCCAGAGTATGGACAAGCATGGGTGGCTACTCTAAGAGGTGACGTGTACAGCTTTGGAGTTGTTTTGCTTGAGCTTCTCACTGGAAGAAGACCTATGGATGTATGCAAACCGAAAATTTCAAGGGAATTGGTTAGCTGGGTTCAACAGATGAAAATTGAAGGAAAACAAGAACAAGTATTTGACTCGAATCTACGAGGGAAAGGATTTGAAGGAGAGATGCTATACGTACTTGATGTGGCATGCATGTGTGTAAACATGAATCCTTTCAAGAGACCACGCATCAGAGAAGTTGTTGAATGGTTAAAAAATGTTGGATCAGAAAACCAGCTCAGAAATAACGATTAA 3441 0.3784 MVNGWSCSHPVPPPKIFSLIGSSLPYSSLLHSSSSFFTPTLKFIHSNFNLTSSSMRSNPLSTSSQLPFYPSSNNYMFFSKLMFLFITKTLFLSLFFVHVFSTCNQLDKDSLLSFSSKILTFSPHPSLNWSSSSDCCNWEGIICDQNNHHVKQILLHNRGLNGFIEFSFITSLQSLSHVNLSHNKLHGNLQNQFFSLVNHVLVLDLSYNHFYGGLPSSNGSGNGNGNNSVIQELDLSSNSFNGTLPVSLIQILAAKGNLISFNVSNNTFTGHIPISSFCINNSAIRFLDFSSNDFAGVIDTGLGACSKLERFRAGFNFLTGNIPVDIYDAVSLTEISLPLNRINGTIDDGIVNLANLTVLELYSNNLTGSIPKEIGKLSKLERLLLHVNNLTGSIPSSLMNCHNLVVLNLRVNDLEGNLSAFNFSGLGRLVTLDLGNNRFSGVLPSSLYDCKSLAALRLASNNLVGQVSSEILGLESLSFLSISTNMLKNITGALRILTGLKKLSTLMLSKNFYNETLPNDENLIGPDGFQKIQVLGLGGCNFTGQIPSWLRKLKKLEAVDLSYNLLSGSIPPWLGTLSELFYIDLSVNLLTGPFPIELTKLPALASQQANDKVQRTYLELPVFANANNVSLLQYNQLSSLPPAIYLGTNHLNGSIPVEVGQLKVLHTLDLNLNNFSGNIPDQFSNLKNLETLDLSGNQLSGGIPASLNNLHFLSFFSVANNNLQGQIPTGGQFNTFSNSSFEGNPQLCGSVIQRPCSSQRNATSTSASGKSSKKIIVTLIIVVSFGIATMVTLLTLWILSKRRVNPRGDSDKIELESISPYSNSGVHPEVDREASLVVLFPNKNNDTKDLCILEIIKATENFSQANIVGCGGFGLVYKATFQNGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGYRLLIYNYMENGSLDYWLHEKPDGSSQLDWPTRLKIAQGASCGLAYLHMTCEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYETHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVLLELLTGRRPMDVCKPKISRELVSWVQQMKIEGKQEQVFDSNLRGKGFEGEMLYVLDVACMCVNMNPFKRPRIREVVEWLKNVGSENQLRNND* 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2057 1146 ProSiteProfiles Leucine-rich repeat profile. 688 711 IPR001611 GO:0005515
Tpr5g2057 1146 Pfam Protein tyrosine and serine/threonine kinase 866 1131 IPR001245 GO:0004672|GO:0006468
Tpr5g2057 1146 Gene3D Ribonuclease Inhibitor 422 765 IPR032675 -
Tpr5g2057 1146 PANTHER LEUCINE RICH REPEAT KINASE 2 83 1137 - -
Tpr5g2057 1146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 984 996 IPR008271 GO:0004672|GO:0006468
Tpr5g2057 1146 SMART serkin_6 862 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2057 1146 ProSiteProfiles Protein kinase domain profile. 862 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2057 1146 SUPERFAMILY L domain-like 257 605 - -
Tpr5g2057 1146 ProSitePatterns Protein kinases ATP-binding region signature. 868 891 IPR017441 GO:0005524
Tpr5g2057 1146 Pfam Leucine rich repeat N-terminal domain 107 144 IPR013210 -
Tpr5g2057 1146 SUPERFAMILY L domain-like 102 337 - -
Tpr5g2057 1146 Pfam Leucine Rich Repeat 688 710 IPR001611 GO:0005515
Tpr5g2057 1146 SUPERFAMILY Protein kinase-like (PK-like) 850 1133 IPR011009 -
Tpr5g2057 1146 Gene3D Phosphorylase Kinase; domain 1 829 937 - -
Tpr5g2057 1146 SMART LRR_typ_2 553 577 IPR003591 -
Tpr5g2057 1146 SMART LRR_typ_2 686 710 IPR003591 -
Tpr5g2057 1146 SMART LRR_typ_2 172 196 IPR003591 -
Tpr5g2057 1146 SMART LRR_typ_2 426 449 IPR003591 -
Tpr5g2057 1146 SMART LRR_typ_2 353 377 IPR003591 -
Tpr5g2057 1146 SMART LRR_typ_2 474 496 IPR003591 -
Tpr5g2057 1146 PRINTS Leucine-rich repeat signature 429 442 - -
Tpr5g2057 1146 PRINTS Leucine-rich repeat signature 686 699 - -
Tpr5g2057 1146 Gene3D Transferase(Phosphotransferase) domain 1 938 1146 - -
Tpr5g2057 1146 PANTHER OS06G0692500 PROTEIN 83 1137 - -
Tpr5g2057 1146 Gene3D Ribonuclease Inhibitor 228 327 IPR032675 -
Tpr5g2057 1146 Gene3D Ribonuclease Inhibitor 106 227 IPR032675 -
Tpr5g2057 1146 Gene3D Ribonuclease Inhibitor 328 421 IPR032675 -
Tpr5g2057 1146 SUPERFAMILY L domain-like 529 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2057 Tpr-Chr5 41095810 41099586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2057 78 760 Miscellaneous Gene Families AT1G17240 52.332 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr5g2057 PK_Tyr_Ser-Thr 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2057 - - gmx:100781943 1583.54