Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2055 ATGGTAATGCCAAAATATACACCTTTTGTTTTAATTCTTTTACTATTCGGGGCGTGTAACAAATCATTTGCCTCATCATTCATTCCAATTGATAATTATTTGGTCGCTTGTGGTTCTTCCCACGATATCACTTTTCAGGGTCGAACTTTCATACCTGAATTTAAATTTAATCATTCCAACCTTCAAATAATAGCCAATAAATCTATTGCTGTTACTTCTAAACCCAACACTACACTTTCACCACTCTATAATTCAGCTCAACTCTTCTTTGAAAAGGCATCATATAAATTCAAAATTCAACAACACGGGAGACATTGGATCCGTCTCTATTTTCACCCTTTTCCTGATTCCAACCCAAACATGACCTTTGCCTCAATAAAAGTAACCACTGATAGTTTTGTGCTTCTTGATAACTTCACTTTTGCAAACTATACGAACTCTCATTTTAAGAAGGAGTACGCGATCAACATTACATCAGACGAGTTATCACTTACTTTCATCCCTCTAAACAATTCACTTGTCTTTGTTAACGCCATAGAAGTTATCTCTATATCAGATGAGCTCTTCTTTGACCATATAGTAGTAACTCTAAATCCATCAGGCTTTTTTGAACAATTCTCAAAGTCTGCCCTTGAAACAGTGTACAGAGTGAATATTGGAGGTGCAACTTTGAGTGACACCCTTGGAAGGACTTGGGAGAATGATGAATATTACTTCCGCCACCCCATAAACACCTCCACTAGTTCTTATCTCGTATCTACAAACCCTTCTGCAATAAAGTATTCTGTTGCTGCTCCACCATCGGTTTATGCCACGGCCAGAGCCTTGAAAATTGCATCACAGTCACAATCACAAGGATACGACTTAAGTTGGATCTTTAATGTAGATCCAAACTTCATGTATTTTGTTCGGGTTCATTTCTGTGACATAATTAACAATTCACTGAACAACAAAATGGTTTTCAATTTATTTATAAATGGAGCATTTGCGGTTAGAAGTCTTGATCTCTCATCCAAAACTAGAAGACTTGCTGTCCCATATTACCATGACTTCATCTCCTACTCCTCAAGAAATACTTTCAAAGTGAGTGTGAGTGTTGATCCTGATACGAGGGCAGACACGTTAGATGCAATCATGAATGGTGTTGAAATATTGAAAATTAGCAACAATGCAGGTAGATTGAACGAGTTTTCTTCTTTTGAGGGCTTTTATTCTAACTTACCAGAAAATGAGGCAAGTGTTTTAGATTCACCAAAAAAAACTTCGAAAATAAGTACAAAACTAGGGATTTGGTGGGCTGTCATTTTAATTGGTTGCAGTGTGTGTGTTTTGGCGTTTCTAGCATTTGGTGGACTATCATTTTGTTATTTGAAAGGTCGCTGGAGGAAGAAGAAATCAGTAACTAGTTTTAAGTTTCTGAGACATTATACTTTGCCTGAGATGCAACAAGCAACAAATTATTTTGATGCTGAGCTGATTACTGGAGCAGGAGGATTTGGAAAGGTGTATAAAGGAAAACTAGAAAATGGGAAAGTAGTAGCCATCAAAGTAGCAAATCCTGAATCTAGACAAGGACTCAGTGAATTCCAAAATGAAATTGAGTTGTTGTCTGGTCTTCGTCATCAAAACCTTGTATCTCTTGTAGGTTGTTGTAATGAAGACTCAGAACTGATTCTGGTATATAATTACATGGCAAATGGATCGCTCAACAGTCATCTATATGGTAGGGACTTTGTTCCTCTATCTTGGAAGCAACGCCTTGGGATATGTTTAGGGGCTGCAAAGGGACTTTTATATCTTCACACTGGAGCTAAACAGAGCATAATTCACCGTGATGTGAAGACAACAAACATTCTCTTGGATGAAAATCTTGTGCCAAAAGTTGCGGATTTTGGTATATCAAAAAAGGGTCCTCTTCTTGATAAAAGCCATGTTACAACCAATGTAAAGGGTAGTTTTGGCTATGTTGATCCAGAATATTTTTGGACTAAGTATCTCACTAAGAAATCGGATGTTTACTCGTTTGGGGTGGTGTTGATTGAAGTTATATGTGGGAAGCCTGCTTTAGATGATGCCCGTAAGACACAGGAGATGAATTTGGCACTGTGGGCATTAAGCTGCCATAAAAAAGGTACTTTCAATGAAATGGTAGATCCATATTTGATTGGAAAAGTTAATATGGATTCTCTAAACAAGGTTTTAGAGTTGGCATGGAAGTGCTTGGAGGAGCGTCGGGTTAACAGACCATCAATGGGGTATGTATTATGTCAACTAGAAGAAGCTCTCCATCTTGAGTTGGCTTCACATGTTTTGAATGACAATGACAATGAATTTACAGATGATATAGAAGCTGTTGTTTGA 2361 0.3748 MVMPKYTPFVLILLLFGACNKSFASSFIPIDNYLVACGSSHDITFQGRTFIPEFKFNHSNLQIIANKSIAVTSKPNTTLSPLYNSAQLFFEKASYKFKIQQHGRHWIRLYFHPFPDSNPNMTFASIKVTTDSFVLLDNFTFANYTNSHFKKEYAINITSDELSLTFIPLNNSLVFVNAIEVISISDELFFDHIVVTLNPSGFFEQFSKSALETVYRVNIGGATLSDTLGRTWENDEYYFRHPINTSTSSYLVSTNPSAIKYSVAAPPSVYATARALKIASQSQSQGYDLSWIFNVDPNFMYFVRVHFCDIINNSLNNKMVFNLFINGAFAVRSLDLSSKTRRLAVPYYHDFISYSSRNTFKVSVSVDPDTRADTLDAIMNGVEILKISNNAGRLNEFSSFEGFYSNLPENEASVLDSPKKTSKISTKLGIWWAVILIGCSVCVLAFLAFGGLSFCYLKGRWRKKKSVTSFKFLRHYTLPEMQQATNYFDAELITGAGGFGKVYKGKLENGKVVAIKVANPESRQGLSEFQNEIELLSGLRHQNLVSLVGCCNEDSELILVYNYMANGSLNSHLYGRDFVPLSWKQRLGICLGAAKGLLYLHTGAKQSIIHRDVKTTNILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYVDPEYFWTKYLTKKSDVYSFGVVLIEVICGKPALDDARKTQEMNLALWALSCHKKGTFNEMVDPYLIGKVNMDSLNKVLELAWKCLEERRVNRPSMGYVLCQLEEALHLELASHVLNDNDNEFTDDIEAVV* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2055 786 SMART serkin_6 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2055 786 CDD STKc_IRAK 495 760 - -
Tpr5g2055 786 PANTHER OS03G0759600 PROTEIN 22 777 - -
Tpr5g2055 786 Gene3D - 32 185 - -
Tpr5g2055 786 Gene3D - 209 389 - -
Tpr5g2055 786 SUPERFAMILY Protein kinase-like (PK-like) 464 758 IPR011009 -
Tpr5g2055 786 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Tpr5g2055 786 PANTHER OS07G0166700 PROTEIN 22 777 IPR045272 GO:0004714|GO:0006468
Tpr5g2055 786 Gene3D Phosphorylase Kinase; domain 1 460 563 - -
Tpr5g2055 786 Gene3D Transferase(Phosphotransferase) domain 1 564 783 - -
Tpr5g2055 786 Pfam Protein tyrosine and serine/threonine kinase 495 754 IPR001245 GO:0004672|GO:0006468
Tpr5g2055 786 Pfam Malectin-like domain 37 386 IPR024788 -
Tpr5g2055 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Tpr5g2055 786 ProSiteProfiles Protein kinase domain profile. 488 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2055 Tpr-Chr5 41032534 41035649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2055 17 767 Receptor kinase-like Gene Family AT2G21480 41.332 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr5g2055 Malectin_like 1.5e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2055 - - mtr:MTR_8g467150 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2055 5 41032534 41035649 Tpr5g2055 5 41032534 41035649 ECH