Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2031 ATGGGACAAGAATCAGATTACAAAACACAATTGGTATTAGATATATGCTCCATTTCCAAACGTTCAATTCTATGTGTTCATACAATTTTCTCTAATATACCTTTCATCGATTGGTATTGCATTCTTGGTGTGGAAGAAAATGCAGGGGTTAATACCATTCGTAAGAAATACCATAAACTTGCCTTACAACTTCATCCAGATAAGAATGAACATCCTAAGGCTGAAATTGCATTCAAACTTGTTTGTGAGGCATATACATGTCTATCAGATGCTACAAAAAGAAAAGCTTTTAACTTAGAGAGACAAAAGAGCTTTTGCATTAAGTGCAACAAAATCCCATATACAACCACCATTGTCCCAAGCAACTCTAATGGTTCCAATGGTTCAAGTTTCAAGGCATGGAACATTATCAGCAAATCAATATCAAGCAAAGTTAGAAGAAACATTAGAGACATGAGAGAAAGATTCAAGGAAGAAGCTAAGGTGATTGAGAATTGTCTAAGGACAACAAATTCAGTGTCAAAGAAAGATTCTCAAAATAGAGTTGAGAAAGAAAGTCCTGTTTTCAATCCATCAAACTACAAATACCAAAATTACCCTCATCCTAGGAACAAAGTTTACAAGAATTCCAAGACATTTTGGTACTTGCAGACAGAAAATATGGGGCATAAAGATAAGGGAGATGCTAAAGCTAAGTATACCTCTCCAATTTTTGAGGTCAAATCAAGTAGTATGGACACAAGAAAATTTGCTTGTGTTTCATCTTAA 768 0.3451 MGQESDYKTQLVLDICSISKRSILCVHTIFSNIPFIDWYCILGVEENAGVNTIRKKYHKLALQLHPDKNEHPKAEIAFKLVCEAYTCLSDATKRKAFNLERQKSFCIKCNKIPYTTTIVPSNSNGSNGSSFKAWNIISKSISSKVRRNIRDMRERFKEEAKVIENCLRTTNSVSKKDSQNRVEKESPVFNPSNYKYQNYPHPRNKVYKNSKTFWYLQTENMGHKDKGDAKAKYTSPIFEVKSSSMDTRKFACVSS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2031 255 SMART dnaj_3 36 93 IPR001623 -
Tpr5g2031 255 Pfam DnaJ domain 37 98 IPR001623 -
Tpr5g2031 255 PANTHER BNAC03G44070D PROTEIN 4 244 - -
Tpr5g2031 255 CDD DnaJ 37 90 IPR001623 -
Tpr5g2031 255 Gene3D DnaJ domain 36 162 IPR036869 -
Tpr5g2031 255 PRINTS DnaJ domain signature 39 57 IPR001623 -
Tpr5g2031 255 PRINTS DnaJ domain signature 57 72 IPR001623 -
Tpr5g2031 255 PRINTS DnaJ domain signature 73 93 IPR001623 -
Tpr5g2031 255 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 244 - -
Tpr5g2031 255 SUPERFAMILY Chaperone J-domain 26 99 IPR036869 -
Tpr5g2031 255 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2031 Tpr-Chr5 40590070 40591951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2031 37 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 4.18e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2031 - - gmx:100801809 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2031 5 40590070 40591951 Tpr5g2031 5 40590070 40591951 ECH