Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2015 ATGGCGACGGAAAAGTTAATGGCCGCCGGTGGCCCTAAATACGTTCAAATGAGATCGTCTCCGCCTTCGTCTCCTCCTCCGGCAACTGCTGATTTTGCATCACTTCCGTCTTTTCGTTACAGTAGCGGCGAAGTCTATCGGATTTTCGATGAATTGCCTAAAGCTAATATCGTTTCCGTTTCTCGTCCTGATGCCAGTGATATTAGCCCTATGCAACTCTCTTATACAATTCAGGTTCAATATAAACATTTCAAGTGGGAGCTAGAGAAGAGAGCGCACCAAGTATTTATTTTGCATTTTGCGTTAAAGAAGCGTGCCTTTATTGAGGAAATCCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGCGAACACACTACTATGGAGCAAGTTGACGAAGAAGGTGACGATGAAACAGTTCCTTTACAAACTGATGAAAGTGCTAAAAACAGAGACGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCAGCTTTAGGACGACAACATTCTATTGCAGACAGGGCAAAAAGTGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATTAGTATTGTTAACTCTCCCGAGGTTTGCAAGTTTTTGGAGGTGTCAATGTTATCTTTTTCACCGGAATATGGCCCTAAGCTGAAGGAAGAATCTGTGATGGTGAAGCATTTGCCTAAGATCAAAAAAGATGATGACTCCAGAAAATGTTGTTTCTCTGACTGTTTTAATTGTTGTAATGACAATTGGCAAAAGGTGTGGGCCGTATTGAAACCTGGATTCTTGGCATTGCTGGCACATCCTTTTGATACACAACCCTTGGACATTATTGTTTTTGATGTACTGCCCGCCTCAGATGCTAATGGAGATGGTCGTTTATCATTAGCGATTGAAATGAAGGAACGGAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAATCCGAAGTATTAGAATTAGAGTTAAAAGTAGTAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCTCCCGAAGGCTGGTGTCATCCTCACCGCTATGGTTCTTATGCTCCTCCAAGAGGCTTAATTGAAGATGACAGCCAAGCCCAGTGGTTTGTAGATGGGCAAGCAGCATTTGAAGTCATTGCTTCTGCAATTGAGGATGCCAAATCTGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCCAGGCTCATGCTTCATCAAGGCTTGATAATCTGTTGGAAGCAAAAGCTAAGGAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTGTTGATAATCATATTTGCTTCATCGGAGGACTGGATTTATGCTTTGGTCGATATGACGCACCTGAGCATAAAGTCGGAGATGTCCCTCCGCTAATGTGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGTTCGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCACATGAACAACAAATACCATTACTTATGCCTCAACATCATATGGTTATTCCCCATTACTTGGGAAGCAATGAGACACCAAGTGAAATTCAGGACAATGTCAATGATAAAGCCTTCAAGAGAGAAGATTCATTTTCCTCATGTTGCCAAGACCAAGATATTCCTCTACTCCTGCCTCAGGAACCGGTTGGGTTGGATATTCCTCCAGGACTCCCAAAACCAAATGGGCGAAACTCCTCTCAACATAACCATGACAAGCCAAGAAGGATAAGCACTGGCCTTCCTTTCTCATTCCGAAGGGCCAAAGTAGCAGCAGTTGGTCCGGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTCTGAGCATTATCACGAGAAAATGCCTCATGATAGAGTGTCTCATGTTGATTCACAAAATACAGATCTGGAATGGTGGGATACTCAAGAGCGGGATGATCAGGGAGGTTTTGCTGATGAATCTGGACAAATTGGTCCTCGTGCTTCGTGTCGTTGTCAGGTTATTAGAAGCGTCAGTCAGTGGTCCGCCGGAACAAGTCAAACTGAAGAGAGCATCCACCATGCTTATTGCTCTCTCATTGAGAAAGCTGAATACTTCATCTACATCGAGAACCAGTTTTTTATCTCGGGTCTTTCTGGAGATGATATGATACGTAATCGTGTGTCAGAAGCTTTATATCGGCGGATTATGCGAGCTTATAATGAAAAAAAATCTTTTAGGGTTATAATCGTCATACCGCTCCTGCCTGGCTTCCAGGGGGGGATTGATGATGGGGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGGTGCATTCTATCTTACATAATCTTCATGAGCTTCTTGGTTCAAGAGTACATGACTACATCTCTTTTTATGGTCTAAGGAATTATGGTAGACTCTCTGATGGTGGTCCTGTGGCAACCAGCCAGGTATACGTTCATAGTAAAATCATGATTATTGATGATTGTATTAGTTTGATTGGATCTGCTAATATTAATGATAGAAGCTTACTCGGCTCCAGGGACTCTGAGATTGGTGTAGTTATAGAAGACAAAGAGTTGACTGATTCTTATATGGATGGAAAGCCTTGGAAGGCAGGGAAGTTTTCTTTGACTCTTCGATTAGCATTATGGTCTGAACACTTGGGTCTCCCGGCAGGAGAGGTCAATCAAATAATGGACCCAATTGTTGATTCTACATACAAGGATATTTGGATGACAATAGCAAAGACAAATACAGCAATTTATCAGGATGTCTTTTCCTGTGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAACATGGCTTTGTGGAAAGAAAAAATTGGACACACTACCATCGATTTAGGAATAGCCCCGGATAAACTAGAGTCCTATCAGGATGGAGATATCAAGAACACTAATCCCATGGAGAGATTAGCATCAATCAAGGGTCATCTTGTTTCTTTTCCCTTGGAGTTCATGAGTCAAGAAAGTCTAAGACCTACTTTTAGTGAAGGTGAATACTATGCCACTCAAGTTTTCCATTGA 3357 0.423 MATEKLMAAGGPKYVQMRSSPPSSPPPATADFASLPSFRYSSGEVYRIFDELPKANIVSVSRPDASDISPMQLSYTIQVQYKHFKWELEKRAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTMEQVDEEGDDETVPLQTDESAKNRDVPSSAALPIIRPALGRQHSIADRAKSAMQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEESVMVKHLPKIKKDDDSRKCCFSDCFNCCNDNWQKVWAVLKPGFLALLAHPFDTQPLDIIVFDVLPASDANGDGRLSLAIEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSYAPPRGLIEDDSQAQWFVDGQAAFEVIASAIEDAKSEIFICGWWLCPELYLRRPFQAHASSRLDNLLEAKAKEGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDAPEHKVGDVPPLMWPGKDYYNPRESEPNSWEDTMKDELVREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPHEQQIPLLMPQHHMVIPHYLGSNETPSEIQDNVNDKAFKREDSFSSCCQDQDIPLLLPQEPVGLDIPPGLPKPNGRNSSQHNHDKPRRISTGLPFSFRRAKVAAVGPDTPMKGFVDDLDSEHYHEKMPHDRVSHVDSQNTDLEWWDTQERDDQGGFADESGQIGPRASCRCQVIRSVSQWSAGTSQTEESIHHAYCSLIEKAEYFIYIENQFFISGLSGDDMIRNRVSEALYRRIMRAYNEKKSFRVIIVIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGVHSILHNLHELLGSRVHDYISFYGLRNYGRLSDGGPVATSQVYVHSKIMIIDDCISLIGSANINDRSLLGSRDSEIGVVIEDKELTDSYMDGKPWKAGKFSLTLRLALWSEHLGLPAGEVNQIMDPIVDSTYKDIWMTIAKTNTAIYQDVFSCVPNDLIHTRLAFRQNMALWKEKIGHTTIDLGIAPDKLESYQDGDIKNTNPMERLASIKGHLVSFPLEFMSQESLRPTFSEGEYYATQVFH* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2015 1118 CDD PH_PLD 199 346 - -
Tpr5g2015 1118 PANTHER PHOSPHOLIPASE D 41 1115 IPR015679 -
Tpr5g2015 1118 Gene3D Endonuclease Chain A 368 607 - -
Tpr5g2015 1118 SUPERFAMILY Phospholipase D/nuclease 334 603 - -
Tpr5g2015 1118 MobiDBLite consensus disorder prediction 133 155 - -
Tpr5g2015 1118 Pfam PLD-like domain 788 964 IPR025202 -
Tpr5g2015 1118 SUPERFAMILY PH domain-like 255 346 - -
Tpr5g2015 1118 MobiDBLite consensus disorder prediction 1 28 - -
Tpr5g2015 1118 CDD PLDc_vPLD1_2_yPLD_like_2 775 959 - -
Tpr5g2015 1118 PANTHER PHOSPHOLIPASE 41 1115 - -
Tpr5g2015 1118 CDD PLDc_vPLD1_2_yPLD_like_1 376 521 - -
Tpr5g2015 1118 Gene3D Endonuclease Chain A 720 975 - -
Tpr5g2015 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 483 510 IPR001736 GO:0003824
Tpr5g2015 1118 Coils Coil 104 124 - -
Tpr5g2015 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 915 942 IPR001736 GO:0003824
Tpr5g2015 1118 SUPERFAMILY Phospholipase D/nuclease 756 966 - -
Tpr5g2015 1118 SMART pld_4 483 510 IPR001736 GO:0003824
Tpr5g2015 1118 SMART pld_4 915 942 IPR001736 GO:0003824
Tpr5g2015 1118 PIRSF PLD_euk 604 1118 IPR016555 GO:0004630|GO:0006654|GO:0048017
Tpr5g2015 1118 PIRSF PLD_euk 50 622 IPR016555 GO:0004630|GO:0006654|GO:0048017
Tpr5g2015 1118 Pfam Phospholipase D Active site motif 483 510 IPR001736 GO:0003824
Tpr5g2015 1118 Gene3D - 235 347 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2015 Tpr-Chr5 40274694 40294960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2015 1 999 Phospholipase D Gene Family (Wang group) AT3G16785 71.118 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2015 K01115 - gmx:100780514 1966.81