Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2007 ATGGAACACACCGACGAATCTGTTGACGTTGAGTCCAGAGACCTTCATTCCACTAAAGGTACTGATACGTATGATTTAGAATCGAATGCCGACGAGGATGACAGTTATTCAGGATCCAGTGGGGATGAAAGTTCAGAGACTGAAAGTTCAGAGACTGGCGAAGATGCATCTGATAATATTGGAGCTGCAGTTCATAGTGAGGTAAATTTTGATTCAATTACTTCTGATGAGATTCGAGCCATGGAATTTGCTACTGTTAGTGAAGCTTATGAATTTTATTACCGGTATGGTAAATGTAAGGGTTTTGCTATTATGAAAGCTTCTAGTAGGATAAAAGAGTTAGATGGTAATAAAGTAACACAAATGAAGCAGTTTGTTTGCAACAGACATGGTTTAAGAGAGAAGAAACATTTAACCAGGTTAGATAGGAAAGTAGAACATAGATGTTTGAGCCGTACAAATTGTGAAGCTAGGTTTCGTGTGCAATACAGAAAACAAAAGGATAGATATGTAGTTACTGCTTTCGTAGAGTGTCATAACCATGAATTAACCCCAGCTAGGTTTGTTCACCTGCACCCTGTTTATCGTAAAATTTCTGAAGCAGATAAGGCTCAGATTGATGGTCTTCAAACACGTGGAATTAGAACTTGTCATATAATGGGGTACATGATTGCCCAGAAGGGAGGATATGCTAGTGTTGGATTTACAAAGAAAGATTTGTACAATTATTTTGATAAAAAAATGCGTGAGTGTATTAAAGATGGTGATGTTGTCGCTTCTTTAAATTATCTTAATGTAAAGTCGTCTACTGATCCCATGCTATATGCTGAGTATGCCGTCGACAATAGTAATGGACGAATGAGGTCTCTATTTTGGGCTGATGGCAGTAGCAGATCAGACTACTTTTGTTTTGGTGATGTGCTTGCCTTTGACACGACTTACCGGAAGAATAAATACAACTATCCATTGGTTGTATTTTCAGGGTGTAACCACCATTCTCATACAGTAATTTTTGGTGCTGCATTGGTAGCAGATGAAACGACAGAGACGTACAAGTGGGTGTTGAATTGTTTTTTAGAGTGCATGGAAGGTAAACAACCAAAAGCAGTGGTAACAGATGGAGATGGGGCAATGAGGGAGGCCATAAAACAGATTTTTCCCGATGTCACCCACAGGTTATGTGCTTGGCATTTGAATAAGAATGCAGTTGAGAATGTGAAAGATAATCCAGAATTTTTGGACGGTTTTCAAAAAGCCATGTACTCAAATTTCACAAAGGATGAATTTGAAGAGTATTGGTCAGAGCTAATTAAAGAAACTGAAGTGGAACAACATCCATGGGTTGTCAAAACTTATGAGAATAGGTCACTATGGGCAACTGGATATCTACGTGATCAGTTTTTTGGACGTATAAGGACTACGTCTCAATGTGAAGCTGTTAATGCAATAATAAAGACTTATGTCAGGACGAAAGGCTGCATTTTTGAATTCATGCATAATTTTGATAAGGTTTTGAGAGATTACAGAAATAATGAATTGGAAGCTGATTTTAAGTCAAAGTTTACGGTACCTGTGTTGACAACTCAACTGCATGTGATTGAGAGTGATGCCGCCAATACTTATATTGCGGAGATTTTCAAAGAAGTTAAAGAGCAAATTCTGAAGGCTGTTGTTTGA 1677 0.3798 MEHTDESVDVESRDLHSTKGTDTYDLESNADEDDSYSGSSGDESSETESSETGEDASDNIGAAVHSEVNFDSITSDEIRAMEFATVSEAYEFYYRYGKCKGFAIMKASSRIKELDGNKVTQMKQFVCNRHGLREKKHLTRLDRKVEHRCLSRTNCEARFRVQYRKQKDRYVVTAFVECHNHELTPARFVHLHPVYRKISEADKAQIDGLQTRGIRTCHIMGYMIAQKGGYASVGFTKKDLYNYFDKKMRECIKDGDVVASLNYLNVKSSTDPMLYAEYAVDNSNGRMRSLFWADGSSRSDYFCFGDVLAFDTTYRKNKYNYPLVVFSGCNHHSHTVIFGAALVADETTETYKWVLNCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDVTHRLCAWHLNKNAVENVKDNPEFLDGFQKAMYSNFTKDEFEEYWSELIKETEVEQHPWVVKTYENRSLWATGYLRDQFFGRIRTTSQCEAVNAIIKTYVRTKGCIFEFMHNFDKVLRDYRNNELEADFKSKFTVPVLTTQLHVIESDAANTYIAEIFKEVKEQILKAVV* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2007 558 PANTHER OS02G0262500 PROTEIN 77 552 - -
Tpr5g2007 558 Pfam MULE transposase domain 307 401 IPR018289 -
Tpr5g2007 558 Pfam FAR1 DNA-binding domain 91 184 IPR004330 -
Tpr5g2007 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 552 IPR031052 GO:0006355
Tpr5g2007 558 MobiDBLite consensus disorder prediction 1 21 - -
Tpr5g2007 558 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2007 Tpr-Chr5 40013550 40015354 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g2007 MULE 1.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2007 - - ccaj:109792835 649.432