Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1970 ATGCCGCCACAGGGTAATGCAGGAGCAGCCGCCGCGATTTATGATCAAGCTGCCGGCGGCTCCCTGCAAAGCTCGTCAACTGATGCCGGAGATGCTGTCATGGCGCGGTGGCTTCAGTCCGCCGGTTTGCAGCATTTAGGCTCTCCGCTTGCTTCATCCGGTATCGATCATCGCCTTCTCCCTAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAAGAGAAGCAGAGACTTTTGAAGTTAATGAGAAATTTAAATTTTAATGGGGAATCTGGTTCGGAGTTGTATACGTCCAATGCTCAAACTTTTGGTGGAGTGGCTGCATCGGATGGATTTTATACTCCTGATTTCAGAGGGGATTTTGGAGCCGGGCTTTTGGATCTTCATGCCATGGATGACACAGAACTTTTGTCTGAGCATATGATTTCAGAACCTTTGGAACCATCACCCATGCCTGGAGATACAAGAGTATTTGGAGATGATTTCTATCCAATTAACAGCAAGCTGGAAAAAGAAGCAGATGTTGATGCATCAATTAATTTACCTATGAATGAAAAAGAGAATAGTACAAGGGAGAATAACGTCGCTAAGATTAAAGTTGTGGTACGTAAAAGGCCTTTAAACAAGAAAGAGCTTGCTAAGAAGGAGGATGATGTTGTAACTGTAACTGACAATGCATATTTGACGGTCCATGAGCCTAAACTAAAGGTTGATTTGACAGCTTATGTGGACAAGCATGAATTTTGTTTTGATGCCGTTCTTGATGAGCAGGTTACCAATGATGAAGTATACCGAGCTACAGTTGAACCAATTATCCCTACAATTTTTGAACGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAGTTGCACCAGCCAGTTTACAGGAGTCAGAAATATAAATTGTGGCTTAGCTACTTCGAGATATATGGTGGAAAGCTATATGATCTTCTTAGTGACAGAAGGAAACTTTGCATGAGGGAAGATGGACGACAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTTTGATGTTCAAATTGTCAAAGAATTCATTGAAAAGGGAAGTGCTTCAAGAAGTACAGGATCTACGGGTGCTAACGAGGAGTCTTCCAGGTCGCATGCTATCTTACAATTGGTTGTAAAGAAGCACAATGAAGTGAAAGAGGGCAGGCGAAACACTAACAATGATGGAAATGAGGCAAGAAATGGGAAGGTTGTGGGGAAGATTTCTTTCATTGATCTTGCTGGAAGCGAAAGAGGTGCTGACACTACTGATAATGATCGTCAAACACGGATTGAAGGAGCCGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAATGCATTCGCGCTTTAGACAATGACCAGATCCACATTCCATTTCGGGGAAGCAAACTTACAGAAGTGCTGCGGGACTCCTTTGTAGGCAACTCAAAAACTGTTATGATCTCTTGTATATCTCCAGGTGCCGGGTCTTGTGAACACACGCTTAACACCCTGAGATATGCTGATCGGGTTAAAAGTCTTTCTAAAAGTGGAAATCCTAGAAAAGACCCAATTCCTAATAAGGACGTTTCATCTACGTCAACCCCTCCAGCTAGTGCTTGTGCAGAGGATTTTAGTGATCAACGCCAAGAGAAACCAATGGATATGGGCAAGAAGCCATTTGAAAAGGAGAATACTATGTATAGCTCTGCTGCTATTGCTGACAAACAGTTACCTAGTATTTCTTCAAATTACCTATCAAATGGAAGAGAAGATAAAGGCTGGACTTATGCTTCAATGGAGAGGGAGAGGTTCGAAATGAAAAACTCTTATAATGATTCTTCCAGTCAAAAGATGAGCTCTTATTCACAATATGATACAGATGAGAAAGTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGTTCTAAGGAAGAAAAGTCTGAAAGGCCAGCAAACTTGATGAAAAGGGATACCAATGGTTCTGATCTCTTCACCACAAGCTCCAAGCAGCAGACCGCAGGAAATCACAACACTGTTACCACTGGATCCAGGCTTTATGAAGCAGAATCCGCTCCTGATGAGAATATCAATGCAGTAATTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGATACGATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCCGAAGTGGACCAACCAGGAAGCCGTATTGACAATTATGTAGCCCAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCAAGTCTTGTGGGTCTCCAAGCTCGCCTGGCAAGATTCCAACATCGACTAAAAGAACAAGAAATTCTAAGTAGGAAGAGAGTTCCCCGTTCATAA 2415 0.4294 MPPQGNAGAAAAIYDQAAGGSLQSSSTDAGDAVMARWLQSAGLQHLGSPLASSGIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSELYTSNAQTFGGVAASDGFYTPDFRGDFGAGLLDLHAMDDTELLSEHMISEPLEPSPMPGDTRVFGDDFYPINSKLEKEADVDASINLPMNEKENSTRENNVAKIKVVVRKRPLNKKELAKKEDDVVTVTDNAYLTVHEPKLKVDLTAYVDKHEFCFDAVLDEQVTNDEVYRATVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRSQKYKLWLSYFEIYGGKLYDLLSDRRKLCMREDGRQQVCIVGLQEFEVFDVQIVKEFIEKGSASRSTGSTGANEESSRSHAILQLVVKKHNEVKEGRRNTNNDGNEARNGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDPIPNKDVSSTSTPPASACAEDFSDQRQEKPMDMGKKPFEKENTMYSSAAIADKQLPSISSNYLSNGREDKGWTYASMERERFEMKNSYNDSSSQKMSSYSQYDTDEKVQKVSPPRRKGSKEEKSERPANLMKRDTNGSDLFTTSSKQQTAGNHNTVTTGSRLYEAESAPDENINAVIEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVAQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1970 804 PANTHER KINESIN-RELATED PROTEIN 6 663 803 - -
Tpr5g1970 804 PANTHER KINESIN-RELATED PROTEIN 6 3 666 - -
Tpr5g1970 804 MobiDBLite consensus disorder prediction 630 650 - -
Tpr5g1970 804 Pfam Kinesin motor domain 204 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 PANTHER KINESIN-LIKE PROTEIN 663 803 - -
Tpr5g1970 804 PANTHER KINESIN-LIKE PROTEIN 3 666 - -
Tpr5g1970 804 CDD KISc_KIF2_like 198 532 - -
Tpr5g1970 804 Gene3D Kinesin motor domain 174 537 IPR036961 -
Tpr5g1970 804 ProSiteProfiles Kinesin motor domain profile. 198 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 Coils Coil 776 796 - -
Tpr5g1970 804 SMART kinesin_4 196 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 MobiDBLite consensus disorder prediction 628 680 - -
Tpr5g1970 804 ProSitePatterns Kinesin motor domain signature. 433 444 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr5g1970 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 534 IPR027417 -
Tpr5g1970 804 MobiDBLite consensus disorder prediction 546 561 - -
Tpr5g1970 804 PRINTS Kinesin heavy chain signature 279 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 PRINTS Kinesin heavy chain signature 389 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 PRINTS Kinesin heavy chain signature 434 452 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 PRINTS Kinesin heavy chain signature 484 505 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g1970 804 Coils Coil 720 751 - -
Tpr5g1970 804 MobiDBLite consensus disorder prediction 534 574 - -
Tpr5g1970 804 MobiDBLite consensus disorder prediction 651 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1970 Tpr-Chr5 39175939 39183792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1970 190 552 Calmodulin-binding Proteins AT5G65930 32.713 6.02e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1970 K10393 - gmx:100778915 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1970 5 39175939 39183792 Tpr5g1970 5 39175939 39183792 ECH