Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1964 ATGGCAGAATCGGCGGAGATAAAGAGTAAGCAGAGAGACTTCCCTTTGGCATGTGTCAATCAGCTCTCTTCAGCTTCTTCTTCTTCTTCTTCTTCGCCGGGGATTGTCCGCCTCACCACCAACGCTGTTCAAATTCACCACGATTCTCACCAGATTGCTCTCCATGTTAACCTTCCAGATATTCAGATATTCAGATTAGGTCCTGTTCAATCGGTTTGCATAGTGGAAGGTTCTGATGCTGGCAAACAGACATCTTACTCCAGAGGAGTTGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAGGGAACATAACGAATGGAACTAATGCAATGACTTCCAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGTACATATTATGCTGCTGTTATGGAGAACCGCACTGATTTCTTTGGTCGTGTAGTAGTTGATGTTGGCGCCGGCAGTGGTATTTTGTCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTATATGCAATAGAAGCATCTGAAATGGCAGAATACGCACGCAAACTTATAGCTGGGAACCCACTACTGGGTCAACGAATTACCGTTATCAAAGGAAGAGTTGAGGATGTTGTATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTTATTGCCAGAGATAGGTTTCTTACCCCTAATGGCAAAATGTTTCCTACATCGGGAAGGATTCATATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAGTAAGGGGCTGTTCTGGCAGCAACAAAACTATTATGGTGTTGATTTGACGCCCTTACACGGGACTGCCTTTCAAGGATACTTCTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGGTTGTTAATATCTCCTTCTATGTTCCATGCGATGGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATCGACATTCCTCTCAGATTTATAGCCAGTGTGGGTGCTAGAGTACATGGTTTAGCATGTTGGTTTGATGTACTGTTCAATGGAAGTTCTGTGCAAAGGTGGCTTACCACTGCCCCTGGTTCACCGGTAACTCATTGGTATCAGTTACGCTGTGTTCTCTTCCAACCTATTTATGTCATGGCGGGGCAAGAAATTACTGGCAGGCTGCACTTGATTGCACACAGTGCACAGAGTTACACAATCTATTTAACCTTGTCAGCTAAAATGTGGGGTCCTGGCGCTGAGCAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCATACTATAGAATGTCTCAACCTCAAGCTTATCCGTCAACCCAAGATCATCAACCTCAACCATTTTTATCGGCACAGGATGTAAAGAACCAATCTTAA 1536 0.4238 MAESAEIKSKQRDFPLACVNQLSSASSSSSSSPGIVRLTTNAVQIHHDSHQIALHVNLPDIQIFRLGPVQSVCIVEGSDAGKQTSYSRGVAIQFRNEEESEAFHCVFQQWKKEFNVQGGNITNGTNAMTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAIEASEMAEYARKLIAGNPLLGQRITVIKGRVEDVVLPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTSGRIHMAPFSDEYLFVEIASKGLFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLISPSMFHAMDFTKIKEEELYEIDIPLRFIASVGARVHGLACWFDVLFNGSSVQRWLTTAPGSPVTHWYQLRCVLFQPIYVMAGQEITGRLHLIAHSAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPSTQDHQPQPFLSAQDVKNQS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1964 511 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 490 IPR025799 GO:0016274|GO:0018216
Tpr5g1964 511 Gene3D Vaccinia Virus protein VP39 124 286 IPR029063 -
Tpr5g1964 511 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 7 490 - -
Tpr5g1964 511 CDD AdoMet_MTases 185 285 - -
Tpr5g1964 511 Pfam Ribosomal protein L11 methyltransferase (PrmA) 182 255 - -
Tpr5g1964 511 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 139 454 IPR025799 GO:0016274|GO:0018216
Tpr5g1964 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 460 IPR029063 -
Tpr5g1964 511 MobiDBLite consensus disorder prediction 488 511 - -
Tpr5g1964 511 Gene3D - 288 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1964 Tpr-Chr5 39061368 39068104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1964 146 435 C2H2 Transcription Factor Family AT3G12270 33.117 9.42e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1964 K05931 - gmx:100818828 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1964 5 39061368 39068104 Tpr5g1964 5 39061368 39068104 ECH