Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1958 ATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTCGGCTATCAATGCAATAGCCACAAAGGCATCCCTTGCAAAGTTGCCAATGGCTGCAAAATCATTCCTGAATTCCGAAGAACGAGCAGTTTCTCTTGCTTGTCAGGTGCTGCCATAAGTGCAAACGCTACACTTGCCAACACAAACATCTGCAATGGTTTGATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCTAATTCATTTCGGCGGGTACCCTCTTCGCCAAATTTTGGAGACACGCTATCATCTTCTCTCCATAGTAGTTTGTCAAACCTAAGTTGCAGCCCGTCCAGTCCAAGTAATATGCTTGAAAATGACCCTTGTTCGTTAAGATTCATGAGCCCTCCTTCTAGAAGTGATTGTTTCCATAATGCTACGGAAGTACAAGTAGCAGGAGGAGCTGCTGGCGAAGATAGAGTTCAAGCAGTTTGTTCCGAAGAAAAGGGGTGGCTTTTTTGCGCAATTTATGACGGCTTTAATGGGAGGGATGCAGCGGACTTTCTTGCCTGTACACTTTATGACTCTATTGTATCTTATCTGAATACAATAGATTGGGATTCAGAACCAAATTCCATCAAGAATGCTTCTGACAACGAGTGTTTGGATGATAGTCGTATTCTTAATGGGTGCCAATCTTCATCGAGTAAATCATTTTCGCATGTGGTACTTGATAACCTCAAACACATTCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTCTCAATTGGATCTTGTGTTTTACTCGTGCTTCTTCACGGGAATGATTTGTGTACACTCAATCTAGGGGACAGTAGAGCAGTGCTTGCGACATGCAGTACAAGTAATGGAATGAACGGGAATGAGAGATTGAAAGCTATTCAGCTTACTGATGGTCATACTGTTGACAATGAAGATGAAAGAACTCAACTTCTTGCTAGTCATCCTGATGATCCTAAGACCATTGTATCAGGGAGAGTGAAAGGCAAATTGAAGGTTACGCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCACCATATGTTTCAACTGAACCATCATTGAATGTGCATAAAATCTCTACTTCTGATCAATTCGTTATAGTTGCAAGTGATGGTTTATTCGACTTCTTCAGCAACGAGGAAGCAGTAAATCTCGTCGAGTCTTACATCTTAAGCAATCCTCACGGTGATCCAGCTAAATTTCTCATTGAAGAATTAGTAACAAAAGCAGCTGATTCTGCAGGTTTCACCACGGAGGAGTTGATGAATGTTCCGGATGGGAGGAGGAGAAAGTATCACGATGATGTCACTGTAATGGTGATCATCCTTGGGATGAATAAACGGACTTCAAAGGCGTCAATTTGCATCTAA 1473 0.4168 MLSPEGELKISFGYQCNSHKGIPCKVANGCKIIPEFRRTSSFSCLSGAAISANATLANTNICNGLIGEEILPNLDSPNSFRRVPSSPNFGDTLSSSLHSSLSNLSCSPSSPSNMLENDPCSLRFMSPPSRSDCFHNATEVQVAGGAAGEDRVQAVCSEEKGWLFCAIYDGFNGRDAADFLACTLYDSIVSYLNTIDWDSEPNSIKNASDNECLDDSRILNGCQSSSSKSFSHVVLDNLKHILSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATCSTSNGMNGNERLKAIQLTDGHTVDNEDERTQLLASHPDDPKTIVSGRVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLKSPPYVSTEPSLNVHKISTSDQFVIVASDGLFDFFSNEEAVNLVESYILSNPHGDPAKFLIEELVTKAADSAGFTTEELMNVPDGRRRKYHDDVTVMVIILGMNKRTSKASICI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1958 490 SUPERFAMILY PP2C-like 146 478 IPR036457 -
Tpr5g1958 490 CDD PP2Cc 147 477 IPR001932 -
Tpr5g1958 490 PANTHER PROTEIN PHOSPHATASE 2C 2 199 IPR015655 GO:0004722|GO:0006470
Tpr5g1958 490 PANTHER PROTEIN PHOSPHATASE 2C 203 489 IPR015655 GO:0004722|GO:0006470
Tpr5g1958 490 Pfam Protein phosphatase 2C 225 445 IPR001932 -
Tpr5g1958 490 Gene3D - 103 486 IPR036457 -
Tpr5g1958 490 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 199 - -
Tpr5g1958 490 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 203 489 - -
Tpr5g1958 490 ProSiteProfiles PPM-type phosphatase domain profile. 134 477 IPR001932 -
Tpr5g1958 490 SMART PP2C_4 133 475 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1958 Tpr-Chr5 38961489 38966088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1958 4 490 PP2C-type Phosphatase Gene Family AT3G16560 64.646 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1958 - - gmx:100791404 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1958 5 38961489 38966088 Tpr5g1958 5 38961489 38966088 ECH