Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1914 ATGGGGATTAGTGGTAATCATCACCACCATTTGAGTTTTCACATTCCTCGGGTACTCAATTTTCATCACCACAATGAAAAGAATAAGAACATTCTTCCAAAAGGGTATTTGGCTGTGTTGGTTGGTCAAAACGAAGAGCAACAAAGGTTGGTGATCCCACTATTTTACGTCAACCATCCATTATTCATACAATTGTTGAAAACAACTGAAGAAGAAGAAGAATATGAATTCAAGCAGAATGGACTCTTCACCATTCCTTGCAAAATCGACAAGTTTCACGAGGTTCAACGACTGATTGATATGGAGAAATCTCATCATCACCGTCACCATGCTTGGTGTTTTAAAGTTTGA 351 0.3818 MGISGNHHHHLSFHIPRVLNFHHHNEKNKNILPKGYLAVLVGQNEEQQRLVIPLFYVNHPLFIQLLKTTEEEEEYEFKQNGLFTIPCKIDKFHEVQRLIDMEKSHHHRHHAWCFKV* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1914 116 Pfam Auxin responsive protein 25 98 IPR003676 GO:0009733
Tpr5g1914 116 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 10 111 - -
Tpr5g1914 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1914 Tpr-Chr5 38455216 38455566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1914 4 100 Calmodulin-binding Proteins AT2G24400 36.082 2.70e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1914 K14488 - gmx:100526867 133.265