Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1887 ATGGGACAAGAATCAGATTACAAAACACAATTGGTATTAGATATATGCTCCATTTCCAAACGTTCAATTCTATGTGTTCATACAATTTTCTCTAATATACCTTTCATCGATTGGTATTGCATTCTTGGTGTGGAAGAAAATGCAGGGGTTAATACCATTCGTAAGAAATACCATAAACTTGCCTTACAACTTCATCCAGATAAGAATGAACATCCTAAGGCTGAAATTGCATTCAAACTTGTTTGTGAGGCATATACATGTCTATCAGATGCTACAAAAAGAAAAGCTTTTAACTTAGAGAGACAAAAGAGCTTTTGCATTAAGTGCAACAAAATCCCATATACAACCACCATTGTCCCAAGCAACTCTAATGGTTCCAATGGTTCAAGTTTCAAGGCATGGAACATTATCAGCAAATCAATATCAAGCAAAGTTAGAAGAAACATTAGAGACATGAGAGAAAGATTCAAGGAAGAAGCTAAGGTGATTGAGAATTGTCTAAGGACAACAAATTCAGTGTCAAAGAAAGATTCTCAAAATAGAGTTGAGAAAGAAAGTCCTGTTTTCAATCCATCAAACTACAAATACCAAAATTACCCTCATCCTAGGAACAAAGTTTACAAGAATTCCAAGACATTTTGGTACTTGCAGACAGAAAATATGGGGCATAAAGATAAGGGAGATGCTAAAGCTAAGTATACCTCTCCAATTTTTGAGGTCAAATCAAGTAGTATGGACACAAGAAAATTTGCTTGTGTTTCATCTTAA 768 0.3451 MGQESDYKTQLVLDICSISKRSILCVHTIFSNIPFIDWYCILGVEENAGVNTIRKKYHKLALQLHPDKNEHPKAEIAFKLVCEAYTCLSDATKRKAFNLERQKSFCIKCNKIPYTTTIVPSNSNGSNGSSFKAWNIISKSISSKVRRNIRDMRERFKEEAKVIENCLRTTNSVSKKDSQNRVEKESPVFNPSNYKYQNYPHPRNKVYKNSKTFWYLQTENMGHKDKGDAKAKYTSPIFEVKSSSMDTRKFACVSS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1887 255 SMART dnaj_3 36 93 IPR001623 -
Tpr5g1887 255 Pfam DnaJ domain 37 98 IPR001623 -
Tpr5g1887 255 PANTHER BNAC03G44070D PROTEIN 4 244 - -
Tpr5g1887 255 CDD DnaJ 37 90 IPR001623 -
Tpr5g1887 255 Gene3D DnaJ domain 36 162 IPR036869 -
Tpr5g1887 255 PRINTS DnaJ domain signature 39 57 IPR001623 -
Tpr5g1887 255 PRINTS DnaJ domain signature 57 72 IPR001623 -
Tpr5g1887 255 PRINTS DnaJ domain signature 73 93 IPR001623 -
Tpr5g1887 255 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 244 - -
Tpr5g1887 255 SUPERFAMILY Chaperone J-domain 26 99 IPR036869 -
Tpr5g1887 255 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1887 Tpr-Chr5 38050002 38051848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1887 37 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 4.18e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1887 - - gmx:100801809 325.479