Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1882 ATGGCTCCTTTTCCATCTCTTGTTAATGTAATTACAAGAACAATATCTTTGAAGAAAGACAAGAGTTATGGAAAAGATGATGATGCAAGAAAAGTTGTGGAAGCAATGGCAAAAGAAGCAAGGGAGAATGAAATGTTAATAAGTTCATCTGGAATTGTTAAATCTAACAAGTCCAACAATTTTTCATGTGTGTTCACTAAGAAGGGTCAAAAAGGATTGAATCAAGACCGCCTTATTGTTTGGGAGGAATTTGGATGTCAAGAAGACATTATTTTCTGTGGAATTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCTAAAAGAGTCAGAAAAATGTTACCTAGTTTTTTGTTCTGCAATTGGCAAGAAAATCTAGCAGAAAAATCACTTGACATGGATTTTAAGATGGAACCAAACCATAAGTATGATATATGGAAGCAGTCCTACATAAAGACCTTTGCTGCTATTGATCAGGACTTAAAGCAACATACTGGAATTGATTCATTTCAAAGTGGAACCACAGCTTTGACAATTATCAAACAGGGTGAATATCTCATTATAGCAAATGTTGGTGATTCTAGAGCTGTCTTAGCAACCACTTCAGACAATGGCACGTTGACTCATATTCAGCTTACGACCGACTTCAAGCCAAATTTACCAAAGGAAGCGGAGCGCATAATGGAATCAAAAGGGAGAGTATTTTGTATGGAAGATGAACCAGGAGTGTATAGGGTATGGATGCCAAATGGTAAGACACCAGGACTAGCAATATCAAGAGCATTTGGTGATTATTGTGTAAAAGATTTTGGATTAATCTCTGTGCCTGATGTCACACAAAGAAAACTCACCACTCTTGATCAATTTGTCATCTTAGCAACTGATGGGGTATGGGATGTTATTTCCAACCAAGCAGCTATCAAAATTGTTGCTTCAACACCAAATAGAGAAAAAGCAGCTCAAAGGCTAGTGAAGTGTGCTACACATGAATGGAAACGTAAGAGAAAAGGCATTGCAATTGATGATATATCAGCTATTTGTCTCTTCTTTCACTCTGCTCCTTCACATGGAACCACTAAAATTGTTGTATGA 1092 0.3727 MAPFPSLVNVITRTISLKKDKSYGKDDDARKVVEAMAKEARENEMLISSSGIVKSNKSNNFSCVFTKKGQKGLNQDRLIVWEEFGCQEDIIFCGIFDGHGPWGHFVAKRVRKMLPSFLFCNWQENLAEKSLDMDFKMEPNHKYDIWKQSYIKTFAAIDQDLKQHTGIDSFQSGTTALTIIKQGEYLIIANVGDSRAVLATTSDNGTLTHIQLTTDFKPNLPKEAERIMESKGRVFCMEDEPGVYRVWMPNGKTPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTLDQFVILATDGVWDVISNQAAIKIVASTPNREKAAQRLVKCATHEWKRKRKGIAIDDISAICLFFHSAPSHGTTKIVV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1882 363 CDD PP2Cc 60 350 IPR001932 -
Tpr5g1882 363 PANTHER ALPHABET, ISOFORM E-RELATED 1 358 - -
Tpr5g1882 363 ProSiteProfiles PPM-type phosphatase domain profile. 61 350 IPR001932 -
Tpr5g1882 363 SUPERFAMILY PP2C-like 56 352 IPR036457 -
Tpr5g1882 363 SMART PP2C_4 52 348 IPR001932 -
Tpr5g1882 363 Pfam Protein phosphatase 2C 83 327 IPR001932 -
Tpr5g1882 363 Gene3D - 45 353 IPR036457 -
Tpr5g1882 363 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1882 Tpr-Chr5 37913380 37916974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1882 1 351 PP2C-type Phosphatase Gene Family AT3G05640 58.310 2.73e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1882 - - gmx:100817397 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1882 5 37913380 37916974 Tpr5g1882 5 37913380 37916974 ECH