Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1851 ATGTTAGGCGTGTCAGAAAGTTTAAGGTTCGCCATTATAGTTAGGCGATCCGGTTCGGGCGAAAAGATAAAGGCTCAATCGGTGTTAGAGTGTGAACGTAGTGGGAAGTATGTTCCAGCCAAGAAGAAGTTGAAATCTGATTCGTCCGGAACGAGAAAATGCGAATGTCCATTCCGACTTCGTGGTTATTACAACAAGGAAACAAAGCTATGGCGTTTAACTCTTGTCAACGGTATGCATAACCACGAGTTGGACAAAGGGCTTGAAGGACATCTCGTGGCGGGTCGTTTGAAACCGCAGGAGAAGGATTTTATGGACGAGATGACAAGGAATGTGGTGGCTCCAAAAAACATATTTTCCACATTAAAGGAAAGAGATCCAGAGAACAAGACCTCGGAAAAGCAAGTGTACAACGCTCGTCATAGGTACAGAGCTAAAATGAGGGCATCCATGACTGAGATGCAACAATTATGCAAAAAGCTTGACGATAACAAATACTTATTCAAGTATCGGACGGTTGTTGAAGATGGAGTTGAACATCTTCAAGATATATTCTTTGCACATCCAAGATCCGTAACGTTGTTAAATTCTTTTCATACTGTGTTGATGATGGACTCCACATACTAA 627 0.4211 MLGVSESLRFAIIVRRSGSGEKIKAQSVLECERSGKYVPAKKKLKSDSSGTRKCECPFRLRGYYNKETKLWRLTLVNGMHNHELDKGLEGHLVAGRLKPQEKDFMDEMTRNVVAPKNIFSTLKERDPENKTSEKQVYNARHRYRAKMRASMTEMQQLCKKLDDNKYLFKYRTVVEDGVEHLQDIFFAHPRSVTLLNSFHTVLMMDSTY* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1851 208 Pfam Transcription factor AFT 33 84 IPR014842 GO:0000981|GO:0036086
Tpr5g1851 208 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 208 IPR031052 GO:0006355
Tpr5g1851 208 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 29 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1851 Tpr-Chr5 37367308 37367934 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g1851 AFT 5.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1851 - - cam:101511943 181.03