Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1850 ATGAACATTTATCAAGTCCGGAAGAACACTCACCTAGTTGCAGTGTACTACAACAACGGAAAACTGAATCTTTTTAGGATCCACGTTGATGTTACACTAGCTGATCTGAAGCACCAGTTAAGCCAACTCAACGGTTGTCTCAACTGTAGTGATGCAAGAAGGGTGGCCGATGTTGAATATCGTTGTCCGTCAATCTTCTTGGACGGAAGCGTCTTGTGCACCAACATGAAACTTCAAAATGACGGCAATGAGAAGAAAGAGCTTGATGCCGAGGTTCAGCGCAAATATATCTTTGGTGGACATGTTTCTTCCTATATGAAGGTTCTGATGGAAGATGAACCAGAGAAATATAAGTCACACTTCAGTGAATATATCAAGCATGGGATAGATTCAACCACCAAAGAACCACAATGCAAGAGGTAA 423 0.4184 MNIYQVRKNTHLVAVYYNNGKLNLFRIHVDVTLADLKHQLSQLNGCLNCSDARRVADVEYRCPSIFLDGSVLCTNMKLQNDGNEKKELDAEVQRKYIFGGHVSSYMKVLMEDEPEKYKSHFSEYIKHGIDSTTKEPQCKR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1850 140 Gene3D - 69 140 - -
Tpr5g1850 140 PANTHER - 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1850 Tpr-Chr5 37363363 37365564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1850 84 140 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 57.895 1.39e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1850 K02932 - gmx:100785668 87.8113