Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1847 ATGGCACCAAAGAAACGCCCCACTTCTCCTCTCGAGGATGATCAGAAACCTTCAACCCAAAAGCAACCAGAAGACAAAGTAGCTCACGAAGAAGAAGATGAAGATGATTCATCCGAAGAAGAAGAAGAAGAAGAAGGTTCATCATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGATCAATCTCAAACCGCTTCCAAAAACCCTCCACCTTCTACTCCTATCTCAAACCCTAAACCGGCTTCTGAATCTGAATCCGAATCTGGATCAGAATCCGAAACTGATTCCCAACCAGAACCAACTCCACCTCTTAACCCCAAAGTTGTTAAACCAGACGCTTCCAAGCCAATGAAGGCCCAACCAAAGGCCCAAACCCAGGCCCAAACATATTCTATACTAGCCAGATCTGGAACTAAACGTGCCGCTGAAAACGAAAATGACTCAAACCGTTCAAAGAAGAAAACAATCGCCGTTGCCGTCACCACCGGTGGTGATTCCAACGACGAGAATGAGAATGAGACTGAGAAAGACGTGAAATTGACTGGTGAAGACTCAAAGAAGAATACTCAGAGACTTTTCAGCGAACAAGATGAGCTTACTATTCTCAAAGGACTCGCTGATTTCATTTCCAAAACTAAAAAGGATCCGTTGAAGGATGCATTGGCATTTCATAGTTTTGTGAAGAAATCGCTTAGCGCTGAAGCTAGCAGCGCACAATTGAAGAGGAAGGTTCGTACATTGAAGAAGAAGTTTGAAACTAGTGACAGTTTCACTAAACCACATGATAAGAAAGCGTTCAAGCTTTTCAAGAAGGTTTGGGGTAATACTAGTGCAAATGAAGCTGAAGAAAATGGAAAAATTACAAAGGGTGCTAAGAAAGAATTAGTTATATCTAATAAGAAGGAAGCTGCAAAAGTGAAAACTGTTGTTGATAATAGTTTGATTGTGAGTGAACTGTTTCGTTTTGGTGTTTTTGCTGGTTCGTCTGTTTTGAATAAGGATGCTATGGAAAGGTTGTTGGAATTGATCGAGGAATCGAAGAGGGTTGAATTCGTGGAAAAGTGGAAGCAGGTTCAAATTGCTGAAATGGAGTTGCTTGTGAGACGTTCACAGCTGGCTAAGGAACAATCTAACTTGTTATTGCAGGCACTCAAGAAATCAAGCAAGTAG 1173 0.4135 MAPKKRPTSPLEDDQKPSTQKQPEDKVAHEEEDEDDSSEEEEEEEGSSSEEEEEEEEEEKDQSQTASKNPPPSTPISNPKPASESESESGSESETDSQPEPTPPLNPKVVKPDASKPMKAQPKAQTQAQTYSILARSGTKRAAENENDSNRSKKKTIAVAVTTGGDSNDENENETEKDVKLTGEDSKKNTQRLFSEQDELTILKGLADFISKTKKDPLKDALAFHSFVKKSLSAEASSAQLKRKVRTLKKKFETSDSFTKPHDKKAFKLFKKVWGNTSANEAEENGKITKGAKKELVISNKKEAAKVKTVVDNSLIVSELFRFGVFAGSSVLNKDAMERLLELIEESKRVEFVEKWKQVQIAEMELLVRRSQLAKEQSNLLLQALKKSSK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1847 390 PANTHER BNAANNG10740D PROTEIN-RELATED 334 388 IPR007592 GO:0006355
Tpr5g1847 390 PANTHER BNAANNG10740D PROTEIN-RELATED 12 309 IPR007592 GO:0006355
Tpr5g1847 390 Coils Coil 39 69 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 1 190 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 79 99 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 120 136 - -
Tpr5g1847 390 Pfam Protein of unknown function, DUF573 191 275 IPR007592 GO:0006355
Tpr5g1847 390 PANTHER STOREKEEPER PROTEIN-LIKE 12 309 - -
Tpr5g1847 390 PANTHER STOREKEEPER PROTEIN-LIKE 334 388 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 173 190 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 29 60 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 7 28 - -
Tpr5g1847 390 MobiDBLite consensus disorder prediction 154 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1847 Tpr-Chr5 37313585 37315041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1847 82 386 GeBP Transcription Factor Family AT1G61730 30.149 2.98e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g1847 DUF573 4.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1847 - - cam:101512869 346.28