Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1818 ATGTTACTGAAAGTTCTGTTTTATTTAGAAACATATACCAGTGATATTGATATTGTTGAGAATGAATTTCTTAAACAGGAGGTAGCCATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTCGGCTATCAATGCAATAGCCACAAAGGCATCCCTTGCAAAGTTGCCAATGGCTGCAAAATCATTCCTGAATTCCGAAGAACGAGCAGTTTCTCTTGCTTGTCAGGTGCTGCCATAAGTGCAAACGCTACACTTGCCAACACAAACATCTGCAATGGTTTGATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCTAATTCATTTCGGCGGGTACCCTCTTCGCCAAATTTTGGAGACACGCTATCATCTTCTCTCCATAGTAGTTTGTCAAACCTAAGTTGCAGCCCGTCCAGTCCAAGTAATATGCTTGAAAATGACCCTTGTTCGTTAAGATTCATGAGCCCTCCTTCTAGAAGTGATTGTTTCCATAATGCTACGGAAGTACAAGTAGCAGGAGGAGCTGCTGGCGAAGATAGAGTTCAAGCAGTTTGTTCCGAAGAAAAGGGGTGGCTTTTTTGCGCAATTTATGACGGCTTTAATGGGAGGGATGCAGCGGACTTTCTTGCCTGTACACTTTATGACTCTATTGTATCTTATCTAAATACAATAGATTGGGATTCAGAACCAAATTCCATCAAGAATGCTTCTGACAACGAGTGTTTGGATGATAGTCGTATTCTTAATGGGTGCCAATCTTCATCGAGTAAATCATTTTCGCATGTGGTACTTGATAACCTCAAACACATTCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCGGATTTAGTCTCAATTGGATCTTGTGTTTTACTCGTGCTTCTTCACGGGAATGATTTGTGTACACTCAATCTAGGGGACAGTAGAGCAGTGCTTGCGACATGCAGTACAAGTAATGGAATGAACGGGAATGAGAGATTGAAAGCTATTCAGCTTACTGATGGTCATACTGTTGACAATGAAGATGAAAGAACTCAACTTCTTGCTAGTCATCCTGATGATCCTAAGACCATTGTATCAGGGAGAGTGAAAGGCAAATTGAAGGTTACACGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCACCATATGTTTCAACTGAACCATCATTGAATGTGCATAAAATCTCTACTTCTGATCAATTCGTTATAGTTGCAAGTGATGGTTTATTCGACTTCTTCAGCAACGAGGAAGCAGTAAATCTCGTCGAGTCTTACATCTTAAGAAATCCTCACGGTGATCCAGCTAAATTTCTCATTGAAGAATTAGTAACAAAAGCAGCTGATTCTGCAGGTTTCACCACGGAGGAGTTGATGAATGTTCCGGATGGGAGGAGGAGAAAGTATCATGATGATGTCACTGTAATGGTGATCATCCTTGGAATGAATAAACGGACTTCAAAGGCGTCAATTTGCATCTAA 1560 0.4077 MLLKVLFYLETYTSDIDIVENEFLKQEVAMLSPEGELKISFGYQCNSHKGIPCKVANGCKIIPEFRRTSSFSCLSGAAISANATLANTNICNGLIGEEILPNLDSPNSFRRVPSSPNFGDTLSSSLHSSLSNLSCSPSSPSNMLENDPCSLRFMSPPSRSDCFHNATEVQVAGGAAGEDRVQAVCSEEKGWLFCAIYDGFNGRDAADFLACTLYDSIVSYLNTIDWDSEPNSIKNASDNECLDDSRILNGCQSSSSKSFSHVVLDNLKHILSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATCSTSNGMNGNERLKAIQLTDGHTVDNEDERTQLLASHPDDPKTIVSGRVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLKSPPYVSTEPSLNVHKISTSDQFVIVASDGLFDFFSNEEAVNLVESYILRNPHGDPAKFLIEELVTKAADSAGFTTEELMNVPDGRRRKYHDDVTVMVIILGMNKRTSKASICI* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1818 519 SUPERFAMILY PP2C-like 175 507 IPR036457 -
Tpr5g1818 519 Pfam Protein phosphatase 2C 255 474 IPR001932 -
Tpr5g1818 519 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 28 229 - -
Tpr5g1818 519 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 232 518 - -
Tpr5g1818 519 Gene3D - 132 515 IPR036457 -
Tpr5g1818 519 ProSiteProfiles PPM-type phosphatase domain profile. 163 506 IPR001932 -
Tpr5g1818 519 SMART PP2C_4 162 504 IPR001932 -
Tpr5g1818 519 CDD PP2Cc 176 506 IPR001932 -
Tpr5g1818 519 PANTHER PROTEIN PHOSPHATASE 2C 28 229 IPR015655 GO:0004722|GO:0006470
Tpr5g1818 519 PANTHER PROTEIN PHOSPHATASE 2C 232 518 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1818 Tpr-Chr5 36726399 36730950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1818 33 519 PP2C-type Phosphatase Gene Family AT3G16560 64.444 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1818 - - gmx:100791404 720.309