Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1800 ATGAGGGATGCTTTGAATGTGGTTAAGGAAATGGGATTTAATGATCCTTCTAATGTAAATTTTGTTATGGCATTGGTAGCCAAAGGGGCCATGTCGAAATCTTGGTGGGATGCGAAAGTTGTTGTTTTTAAGAGATGGGGTTGGTCGGAAGAAATGGTTCTTGAAGCGTTTAGGAAGCGGCCCTTGTGTATGCTATCATCTGTGGAGAAAATTGATAAGGTGATGAGATTTTGGGTGAATGAGTTGGATTGGAACTCTTCGGCACTTGTGAAAAGGCCGGAGGTCTTTTTGTATAGTTTGGAGAATAGGATCATTCCAAGGGCTAGTGTTGTCTCGTATTTGTTCTCTAAAGGTTTGATAGAAAAGAATGTTGAACTGTCTACCCCATTTGGTGTTAACAAAAAGGTATTTCTTGAAAAGTATCTGCACTGTTTTAAGGAGGAAAGACAGAATTTGTTAAAGCTATACCAGGAAAAAATGAATGTTTGA 489 0.3885 MRDALNVVKEMGFNDPSNVNFVMALVAKGAMSKSWWDAKVVVFKRWGWSEEMVLEAFRKRPLCMLSSVEKIDKVMRFWVNELDWNSSALVKRPEVFLYSLENRIIPRASVVSYLFSKGLIEKNVELSTPFGVNKKVFLEKYLHCFKEERQNLLKLYQEKMNV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1800 162 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 161 - -
Tpr5g1800 162 Gene3D Transcription termination factor 3, mitochondrial 1 155 IPR038538 -
Tpr5g1800 162 Pfam mTERF 33 137 IPR003690 GO:0003690|GO:0006355
Tpr5g1800 162 SMART mt_12 86 120 IPR003690 GO:0003690|GO:0006355
Tpr5g1800 162 SMART mt_12 54 85 IPR003690 GO:0003690|GO:0006355
Tpr5g1800 162 PANTHER CGI-12 PROTEIN-RELATED 1 161 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1800 Tpr-Chr5 36467108 36467596 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1800 mTERF 1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1800 K15032 - gmx:102666739 181.8