Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1792 ATGTTAACTACAAATCTTCATAGAACTTTTCTCTATCTCAAAAACCTAACTTTCCCACCAAAACCTTACCAATACCCATCACAATTATCTCCACATTTTTGCACCAACACTTCAGAAGATTCAACCACTTTTGCAGTCTCCTACCTCATAAACAATTTTGGGTTCTCCCCACAATCTGCATCCAAACTTTGCTCAACCTACCATCTTAGTTTTAAGACTGCCCAAAAACCTGATTCTGTTATCACATTCTTTAGAACCAATGGTTTCTCTAACTCCCAACTACGCGATATCATTGCAAAGTTACCAGGGCTACTTTCCTGCAACCCCTCCATAAGGGTATTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTCAGTAAGAATCCCAGAATCTTGTCTACAAGCGTGGAGAATCATATAGTCCCAACCTATGAATTGCTTTATAGATTCTTGCAATCAGACATGGACATTATTGCTAGTGCAATACGATATCCAGCTTTACTTTGTGAGCATCGTGTGCCACACAACATCACAATCTTGGTTGAGAATGGAGTTGCAGACTCGAGCATTGCAAAATTGCTTCGGAGGAATAGTTGGGTATTCCTGAAATGTGAGATGCTGAATTTAGTGGAGGAATTAAAGAATTTAGGGTTTAATCCTTCAAAAACAACTTTTGGTGTAGCGTTGGAAGCCAAACTAACTGTAAACAAAACATTGTGGAAAGAAAAAGTCGATGCTTTTAAGAAGTGGGGGTGGTCTGATGAAGATGCTCATGAAGCATTTAGAAAGAAACCTCACTGTATGTTGGTATCCATTAATAAAATTAATTCAGTGATGAGCTTTTGGGTCAATCAATTGGGTTGGGATGCGCTTGCCCTTGCAAAAGGACCGTCGGTTTTATCGAATAGTTTGGAAAAAAGTATCATTCCAAGGGCCTCAGTTGTGCAATTTCTGCTGAAGAAAGGTTTGCGAAAAAAGGATGCAAGCTTAACTTGTCCATTTGTAGTGTCTGAGCAGGTGTTTCTTGATACGTGTGTAAAACGTTTTAAGGAGGAGACATCTTATCTATTAAAGCTTTATGAAGAAAAATTGAGTCTTGCACAAACCAGGGACAAAACCGGCATGTCATGA 1158 0.3895 MLTTNLHRTFLYLKNLTFPPKPYQYPSQLSPHFCTNTSEDSTTFAVSYLINNFGFSPQSASKLCSTYHLSFKTAQKPDSVITFFRTNGFSNSQLRDIIAKLPGLLSCNPSIRVLPKFQFLLSKGASNSDIVNLVSKNPRILSTSVENHIVPTYELLYRFLQSDMDIIASAIRYPALLCEHRVPHNITILVENGVADSSIAKLLRRNSWVFLKCEMLNLVEELKNLGFNPSKTTFGVALEAKLTVNKTLWKEKVDAFKKWGWSDEDAHEAFRKKPHCMLVSINKINSVMSFWVNQLGWDALALAKGPSVLSNSLEKSIIPRASVVQFLLKKGLRKKDASLTCPFVVSEQVFLDTCVKRFKEETSYLLKLYEEKLSLAQTRDKTGMS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1792 385 Pfam mTERF 244 350 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 Pfam mTERF 82 227 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 Gene3D Transcription termination factor 3, mitochondrial 162 367 IPR038538 -
Tpr5g1792 385 PANTHER CGI-12 PROTEIN-RELATED 23 377 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Tpr5g1792 385 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 23 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1792 Tpr-Chr5 36253705 36255827 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1792 mTERF 6.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1792 K15032 - gmx:102663414 372.474