Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1784 ATGGATGCAATATCGGCATCACCTTATAAAAGCATGAAGCGATATGTGATATTGATAAAGAGAGGTGTGTACATGGAAAATATTGTGATTGATGAATCTAAGTGGAACCTCATGATTATTGGAGAGGGTATAGATACCACTATCATCTCTGGTAACTTGAATTGTGCCACCTTTAAATGTGGTCAAAATAATAATTTAAGTACATATGATACGGCTACCTTTGCTGTTAGTGGAAAAAGGTTTATCGCGAAAGAAATTTCTTTTCGGAACACGGCTGGGCCAACAAATGGACAAGCAGTGGCACTAAAATCCGATTCAGATTTCTCAGTTTTTTATCGGTGTGAGATTTCCGGCTATCAGGATAGTTTATGCGCAAATACTAATCTTCAATTTTATAAAGAATGCATAATGAGCGGCACAGTGGACTTCATATTTGGATATGCAACCGCGGTGTTTCAAAACTGCATCATATTAGTCAAGAAAGGGTTGCCGGTACAAAAGAACACAATCACAGCTCAAGGAGGAAAATACCAGGGAAGACCAACTGGTTTCTCCTTTCAGTTTTGCAATATCTCTGCAGACTCCGATCTTTTACCAGCAATTAAATCAACCTCGACATTCCTTGGTAGACCGTGGCATCCATATTCAAAAGTAATCTTCATGCAAACTTACATAAGTGATGTTTTGAATCAAGGAGGGTGGTTAGAGTGGAATGGTTCACAGTATTTGGATACATTATATTATGCAGAGTACAATAACTTTGGACCAGGAGCAGACCTACGAAACCGTGTGAAATGGTCTGGCTACCATATGTTGAATGATTCTAGTCAAGCTCGTATCTTCACCGTCGCCCAATTCATTTCGGGGGATCAATGGTTACCTTCTACGGGTGTACCGTTTATCAGTGGTTTAGGGGATCCAAACATTATATAG 933 0.3944 MDAISASPYKSMKRYVILIKRGVYMENIVIDESKWNLMIIGEGIDTTIISGNLNCATFKCGQNNNLSTYDTATFAVSGKRFIAKEISFRNTAGPTNGQAVALKSDSDFSVFYRCEISGYQDSLCANTNLQFYKECIMSGTVDFIFGYATAVFQNCIILVKKGLPVQKNTITAQGGKYQGRPTGFSFQFCNISADSDLLPAIKSTSTFLGRPWHPYSKVIFMQTYISDVLNQGGWLEWNGSQYLDTLYYAEYNNFGPGADLRNRVKWSGYHMLNDSSQARIFTVAQFISGDQWLPSTGVPFISGLGDPNII* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1784 310 Pfam Pectinesterase 2 290 IPR000070 GO:0030599|GO:0042545
Tpr5g1784 310 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Tpr5g1784 310 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 1 304 - -
Tpr5g1784 310 PANTHER PECTINESTERASE 1 304 - -
Tpr5g1784 310 Gene3D - 1 304 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1784 Tpr-Chr5 36132913 36134733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1784 2 304 Carbohydrate Esterase AT3G43270 58.416 1.15e-129 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1784 K01051 - gmx:100798620 421.779