Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1783 ATGATGATACACCAAACCTTATCATCTTCATCTTCATATTCATATTCATCCTTTTCTCCATTTTTTCCACTTCAAATCAAATCTAAATCTTTTCAAATGTTCAATACACCACCACCTTATTTATATCTTAACAAACACTTAACTTTCCCTCTTATCATCCATAACTATCCATCACCATGTTGTTCTCTGCATTTCTGCACCAACACTTCTGATTCAACATCTTTTGAAGTTTCCTACCTCATCAACAATTTCAACTTCTCCCCACAATTTGCTTCCAAACTCTCCTCAACTTACAAGGTTCGTTTCAACACTTCCCAAAACCCTGATTTAGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTACGTTATATCATTTCCAAGGCACCAAGGTTACTTTCCTGTGACCCCTCCAAAAGGGTATTGCCAAAGTTTCAATTTTTACTATCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTCAGTAAGAACCCTATGGTCCTGTCTCCAAGCTTGGAGAATCATATAATCCCAACCTATGAATTGCTTTATAGATTTTTGCAATCAGACAAGGACATTATTGCTGGTGTAGTTCATAATCCAGCATTACTTAGTGACCATCTTGTGCCACAAAACATCACAATGTTGATTAAGAATGGAGTTACAGATTCAAGCATTGCAAGATTGTTTCGGACGCGGTCACGATCATTGAATACGAATACACGTTGCATGCTGAAGTTGGTGGAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAATAACTTTTGGTATAGCATTGGAAGCCAAACTAACTGTAAACAAAACATTGTGGGAAGAAAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTACAGAAGCATTTAGAAGGCAGCCTCATTGTATGTTGGTATCTATTGATAAAATTAATTTAGTGATGAGCTTTTGGGTCGATCAGTTGGGTTGGGATGTGCTTGCCCTTGCAAAAGGACCGTCCGTTTTTTCAAATAGTTTGGAAAAAAGGATCATTCCAAGGGCCTCAGTTGTGCAATTTCTGTTGAAGAAAGGAGGAGTCATCTTATCTATTAAAGCTTTATGA 1122 0.3708 MMIHQTLSSSSSYSYSSFSPFFPLQIKSKSFQMFNTPPPYLYLNKHLTFPLIIHNYPSPCCSLHFCTNTSDSTSFEVSYLINNFNFSPQFASKLSSTYKVRFNTSQNPDLVLNFFRNNGFSETQLRYIISKAPRLLSCDPSKRVLPKFQFLLSKGASNSDIVNLVSKNPMVLSPSLENHIIPTYELLYRFLQSDKDIIAGVVHNPALLSDHLVPQNITMLIKNGVTDSSIARLFRTRSRSLNTNTRCMLKLVEELKDLGFNPSKITFGIALEAKLTVNKTLWEEKVDAFKKWGWSDEDVTEAFRRQPHCMLVSIDKINLVMSFWVDQLGWDVLALAKGPSVFSNSLEKRIIPRASVVQFLLKKGGVILSIKAL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1783 373 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 SMART mt_12 231 261 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 SMART mt_12 332 366 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 51 364 - -
Tpr5g1783 373 PANTHER CGI-12 PROTEIN-RELATED 51 364 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 Pfam mTERF 112 264 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 Pfam mTERF 277 364 IPR003690 GO:0003690|GO:0006355
Tpr5g1783 373 Gene3D Transcription termination factor 3, mitochondrial 175 368 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1783 Tpr-Chr5 36119615 36121183 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1783 mTERF 2.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1783 K15032 - gmx:102663414 322.783