Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1777 ATGGTAACAACACATCACTATTCATCTTCTTCTCTTTCACTCTTTCAAATTTCAACTCTTTTCTTCAAAATTTTCCACTTCAAAATAACAACTCTCATTTTCGTTCAATTTTCACCACAATTCATCATCATGTTCAAGTTCAATTCATTTTGCCACAAAACCCTAATCTATTATCTCAACGGATTAACATTACTATCCCCAAACCCTAACCCTCTTTTGTTTTCTCTTCATTTCTGCACCAACACTTCCGATTCAACCTCATTTGCAGTTTCCTACCTCATCAACAATTTTGGGTTTTCTCCAAAATCTGCTCCCAAACTTTGCTCCACTTACAATGTTCGTTTCAAGACTGCTCAAAAACCTGATTCAGTTCTCAATTTCTTTAGAAACCATGGTTTCTCAGACACCCAATTACGTCATATCATTGCAAAATCACCATGGCTACTTTCCTGCAATCCCTCCAAAAGGGTTTTGCCAAAGTTTGAATTTTTCCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACATTGTCAGTAAGAACCCTGCTGTCCTGTCTGCAAGCCTCGAGAATCGTATAGTCCCAGCCTATGAATTGGTTTATAGATTTTTGCAATCAGACAAGGACACTATTGCTTTGTTGAAGTACAATCCAACTATCTTTGGAACAAGTTATGTGGTAGATAACATCAAAGTGCTTACTGAGAGTGGAGTAACTGACTCAAATATTGCAAGATCGCTTCGGACCTGGATTAAGTTATTCTACAGGACGGACTTGCATGAGTTGGTGGAGGAATTGAAGGATTTGGGGTTTGATCCTTCGCGGTCAATTTTCACAATAGCATTGATCGCCAAAACATCAATAACCAAAACGTTGTGGAAAGAAAAAGTTGATGTTTTTAAGAAATGGGGTTGGTCTAATGAAGATGCTCTTAAAGCATTTAGAAAGCAACCTCATTGTATGTTAACATCCATTGATAAAATTAATTTAGTGATGAGCTATTGGGTCAATCAGTTGGGTTGGGATGCTCTTGCCATTGCCAAAACGCCAAGGGTTTTTGGGGCCAGTCTGGAAAAAACGATCATACCAAGAGCCTCGGTTGTGCAATATCTTTTGAAGAAAGGTTTGCTAAATAAAGAAGCAAGTTTAACTTCTCCATTTGTAGTCACGGAGAAGATTTTCCTTGACATGTATATAAATCGTTTTAAGGAGGAGTCTTCGTATCTATTAAAGCTCTATGAAGAAAAACTGAATCTTGCACAAACCACGGAAGAAACTGGCATGATATGA 1290 0.3775 MVTTHHYSSSSLSLFQISTLFFKIFHFKITTLIFVQFSPQFIIMFKFNSFCHKTLIYYLNGLTLLSPNPNPLLFSLHFCTNTSDSTSFAVSYLINNFGFSPKSAPKLCSTYNVRFKTAQKPDSVLNFFRNHGFSDTQLRHIIAKSPWLLSCNPSKRVLPKFEFFLSKGASNSDIVNIVSKNPAVLSASLENRIVPAYELVYRFLQSDKDTIALLKYNPTIFGTSYVVDNIKVLTESGVTDSNIARSLRTWIKLFYRTDLHELVEELKDLGFDPSRSIFTIALIAKTSITKTLWKEKVDVFKKWGWSNEDALKAFRKQPHCMLTSIDKINLVMSYWVNQLGWDALAIAKTPRVFGASLEKTIIPRASVVQYLLKKGLLNKEASLTSPFVVTEKIFLDMYINRFKEESSYLLKLYEEKLNLAQTTEETGMI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1777 429 Pfam mTERF 125 272 IPR003690 GO:0003690|GO:0006355
Tpr5g1777 429 Pfam mTERF 291 394 IPR003690 GO:0003690|GO:0006355
Tpr5g1777 429 PANTHER CGI-12 PROTEIN-RELATED 70 421 IPR003690 GO:0003690|GO:0006355
Tpr5g1777 429 Gene3D Transcription termination factor 3, mitochondrial 200 411 IPR038538 -
Tpr5g1777 429 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 70 421 - -
Tpr5g1777 429 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Tpr5g1777 429 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Tpr5g1777 429 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Tpr5g1777 429 SMART mt_12 343 377 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1777 Tpr-Chr5 35942082 35947220 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1777 mTERF 2.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1777 K15032 - gmx:102663414 405.216