Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1766 ATGAATATTGAGTCGTCTATCCATCGTCCATGGTTGGAAGAACAATTTCAAGCTAACAGGTTGCCAATGGATTCTGTGGTTCCACAAGAAACCATGTCTATGGATAACGAACTTGAGTGGCAACCTCAATTAGGTAAACTATTCAATACTTGGGAAGAGGCATGGGAATTTTGGAAGGATTATGGGGGAAAAATTGGATTTAATGTTCGAAGGCAATATTTTAATCCAGACAAACATGGAATGGTTTTGTCTGCAAGATATGTGTGTAGTAAAGAAGGTGTTCGTAAGCCAGATAAAAGAGATCGCTTAACAAGTAATCGTCGATTTCAAACAAGAACTGGATGCCCTGTTAAGATGGGAATTAAATACTTGAAAGATATTGCCAAGTATAAAATTCATGATTTTTTTGATAAGCATAATCATGAGTTGCACCTTCCTGAGACGACTCACATGCTTGCATCTCAACGTAATTTATCTAAAATTCAAGCTCATGAGATAGACTTGGAAGATGATGCAGGAATCAAGCAAAGGGCTTTATTTGAGCTAATGAGCAGGCAAGTTGGTGGCAGAGAGAACCTTGGTTACACACGTGTGGATCAAAAGAATTATCTTCGCATCAAACGATTGAAAAACATGGCATACGGGGAGGCTGGCAGTTTATTACAACACTTTCAACAAAAGTGTATAGAAAATCCATCATTTTACCATGGAATCCAATTAGACATTGATGAACAAATAACAAATATTTTTTGGGCTGATGCGAGAATGATAATGGATTATGAATACTTTGGTGATGTAGTCACTCTTGACACTACATATAGTACTAACAATGCATATAGACCATTGGCTATATTTGCAGGATTTAATCACTTTAGAGGAGTGGTCATTTTTGGTGCTGCGCTTCTTTATGATGAAACTGCAGAATCATTTGAATGGACCACGCAATGGCTAAAGCTTTACGTGAGGTAA 969 0.3736 MNIESSIHRPWLEEQFQANRLPMDSVVPQETMSMDNELEWQPQLGKLFNTWEEAWEFWKDYGGKIGFNVRRQYFNPDKHGMVLSARYVCSKEGVRKPDKRDRLTSNRRFQTRTGCPVKMGIKYLKDIAKYKIHDFFDKHNHELHLPETTHMLASQRNLSKIQAHEIDLEDDAGIKQRALFELMSRQVGGRENLGYTRVDQKNYLRIKRLKNMAYGEAGSLLQHFQQKCIENPSFYHGIQLDIDEQITNIFWADARMIMDYEYFGDVVTLDTTYSTNNAYRPLAIFAGFNHFRGVVIFGAALLYDETAESFEWTTQWLKLYVR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1766 322 Pfam FAR1 DNA-binding domain 56 143 IPR004330 -
Tpr5g1766 322 Pfam MULE transposase domain 266 315 IPR018289 -
Tpr5g1766 322 PANTHER OS03G0181600 PROTEIN 35 317 - -
Tpr5g1766 322 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 317 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1766 Tpr-Chr5 35782276 35783528 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g1766 FAR1 5.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1766 - - ahf:112709060 435.261