Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1763 ATGATGGTATACAAACCCTTTTCATCTTCGTATTCTTCTTTTTCACCATTTTTTCCACTTCAAATCAAATCAAAATCTTTTCAAATGTTCACCACACATCATCATACACCACCTTTTCTCTATCTCAAAAACCACTTAACTTTCCCTCTTATCAACCATCACTATCATCCATCACCATGTTGTTCTCTGCATCTCTCCACCAACAACACTTCTGATTCAACCTCTTTTGCAGTTTCCTATCTCATCAACACTTTCAACTTCTCTCCAAAACTTGCTTCCAAACTCTGCTCCACTTACAATATTTGTTTCCAGACTGCACAAAACCCTGATTTAGTTCTTAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTACGTTATATCATTCCCAAGGCACCATGGCTACTTTCCTGCAACCTCTCCTTAAGGGTCATCCCAAAGTTTGAATTTTTTCTATCCAAAGGTGCTTCTGAATCTGACATTGTTAACCTTGTCAGTAAGAACCCTATGGTCCTGGCTCCAAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGTTGTATAGATTCATGCAATCGGACGAGGAAACTATTAATCTTGTAATTCGCAAATCATATTTACTTAGTTCTCATCTTGTGTCATATAACATCAAAATGTTTGTTGATATTGGAGTGAGGGACTCAACCATTTTAAAATTACTTGAGGGGAAATGTAGTTGGTTATTCAAGAAAAACGGAATGCCGAAGATGGTGGAGGAATTAAAGAATTCAGGGTTTCATCCATCAAAAACAACTTTTGTTATGGCATTGCTTGCTAGAGAAAACAAACCAGCATGGAAAGAGAAAGTTGATTTATACAAGAAGTGGGGTTGGTCTGATGAAGATGTAGAAGAAGCATTTAAAAAGCGGCCTCTTTGTATGATGGTATCTATTAATAAAATTAATTCAGTGATGAATTTTTGGGTCAATCAATTGGGTTGGGATGCTCGCGCCCTTACCAAAGCACCGCTTGTTTTGTCGTCAAGTTTGGAAAAAAGGATCACTCCAAGGGCCCATGTTGTGCAATTTCTGCTGGAGAATGGTCTGCAAAAAGAGAGTGCAAGCTTAACTTATCCATTTGTAGTGTCTGAGAAGTTTTTTCGTGATGCGTATTTAAAACGTTTTAAGGAGGAGTCTTCGAATCTATTAAAGCTGTATGAGGAAAAACTTAGTCTTGCATACACCACCGACAAAAATGGCATGCGATGA 1251 0.3765 MMVYKPFSSSYSSFSPFFPLQIKSKSFQMFTTHHHTPPFLYLKNHLTFPLINHHYHPSPCCSLHLSTNNTSDSTSFAVSYLINTFNFSPKLASKLCSTYNICFQTAQNPDLVLNFFRNNGFSETQLRYIIPKAPWLLSCNLSLRVIPKFEFFLSKGASESDIVNLVSKNPMVLAPSLENHIVPTYELLYRFMQSDEETINLVIRKSYLLSSHLVSYNIKMFVDIGVRDSTILKLLEGKCSWLFKKNGMPKMVEELKNSGFHPSKTTFVMALLARENKPAWKEKVDLYKKWGWSDEDVEEAFKKRPLCMMVSINKINSVMNFWVNQLGWDARALTKAPLVLSSSLEKRITPRAHVVQFLLENGLQKESASLTYPFVVSEKFFRDAYLKRFKEESSNLLKLYEEKLSLAYTTDKNGMR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1763 416 Pfam mTERF 280 381 IPR003690 GO:0003690|GO:0006355
Tpr5g1763 416 Pfam mTERF 113 305 IPR003690 GO:0003690|GO:0006355
Tpr5g1763 416 Gene3D Transcription termination factor 3, mitochondrial 194 399 IPR038538 -
Tpr5g1763 416 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 55 408 - -
Tpr5g1763 416 PANTHER CGI-12 PROTEIN-RELATED 55 408 IPR003690 GO:0003690|GO:0006355
Tpr5g1763 416 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Tpr5g1763 416 SMART mt_12 298 329 IPR003690 GO:0003690|GO:0006355
Tpr5g1763 416 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Tpr5g1763 416 SMART mt_12 330 364 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1763 Tpr-Chr5 35661004 35663886 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1763 mTERF 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1763 K15032 - gmx:102663414 352.058