Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1762 ATGAATCCATCCTTCCACTCACTGCCCTCTTCCTTCATTCCTTCAAGGTTTCAAAACAACAATCACCCACCCACCCACCTAGCAGTTTCAAAACAGAAGTTCATGATGATACACCAACCCTTTTCATCTTCATCCACATCTTCATATTCATCCTTTTCTCCATTTTTTCCACTTCAAATCAAATCTAAATCTTTTCAAATGTTCAATACACCACCACCTTATCTCTATATCAACAAGAACTTAACTTTCCCTCTTAACATCCATCACTATCCATCACCATCTTGTTCTCTGCATTTTTCCACCAACAACACTTCTGATTCAACCTCTTTTGCAGTCTCCTACCTCATCAACACTTTTAACTTCACCCCAAAATTTGCTTCCAAACTCTGCTCCACTTACAAGGTATATTTCAAGACAACCCAAAACGCTGATTTAGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTAAGTAATATGATTTCCAAAGGACCATGGCTACTTTGCTGCAACCCCTCCGTAAGGCTCATCCCAAAGTTTCAATTTTTCCTCTCCAAAGGTGCTTCTAAATCTGACATTGCTAACCTTGTCAGTAAGTACCCTATGGTCTTGTCTCCAAGCCTGGAGAATCATATAGTCCCAACCTATGAATTGTTGTATAGATTCATGCAATCAAACAAGGAAACTATTAATCTTGTAATTCACAAACCATATTTACTTAGTTCTTATGTTGTGTTAAATAACATCAAAATATTGGTTGATATTGGAGTGAAGGACTCAACTATTGTAAGATTGTTTGAGCTTCGGAGCTGTACTCGGTTATTCCAGACGAATGAAATGTTAGAGATGGTGGAGGAATTAAAGAATTCAGGGTTTCATCCATCAAAAACAACTTTTGTTATAGCATTGCTTTCTAGAGAAAACAAACCAGCATGGAACGAAAAAGTTGATTTATATAAGGAGTGGGGTTGGTCTGATGAAGATGTAGAAGAAGCTTTTAAAAAGCAGCCTCATTGTATGTTGGTATCTATTACTAAAATTAATTCTGTGATGAATTTTTGGGTCAATCAATTGGGTTGGGATGCTCGCGCCATTGCCAAAGCACCGCATATTTTGTCGTTAAGTTTGGAAAAAAGGATCGCTCCAAGGGCCCCCATTGTGCAATTTCTGATGGAGAGTGGTCTGCGAAAAGAGAATGCAAGCTTAACTTATCCATTTGTAGTGTCTGAGAAGTTGTTTCGTGATACCTATTTAAAACGTTTTAAGGAGGAGTCTTCGAATCTATTAAAGCTGTATGAGGAAAAACTTAGTCTTGCATACACCACCGACAAAAATGGCATGCGATGA 1356 0.3783 MNPSFHSLPSSFIPSRFQNNNHPPTHLAVSKQKFMMIHQPFSSSSTSSYSSFSPFFPLQIKSKSFQMFNTPPPYLYINKNLTFPLNIHHYPSPSCSLHFSTNNTSDSTSFAVSYLINTFNFTPKFASKLCSTYKVYFKTTQNADLVLNFFRNNGFSETQLSNMISKGPWLLCCNPSVRLIPKFQFFLSKGASKSDIANLVSKYPMVLSPSLENHIVPTYELLYRFMQSNKETINLVIHKPYLLSSYVVLNNIKILVDIGVKDSTIVRLFELRSCTRLFQTNEMLEMVEELKNSGFHPSKTTFVIALLSRENKPAWNEKVDLYKEWGWSDEDVEEAFKKQPHCMLVSITKINSVMNFWVNQLGWDARAIAKAPHILSLSLEKRIAPRAPIVQFLMESGLRKENASLTYPFVVSEKLFRDTYLKRFKEESSNLLKLYEEKLSLAYTTDKNGMR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1762 451 Gene3D Transcription termination factor 3, mitochondrial 123 246 IPR038538 -
Tpr5g1762 451 Gene3D Transcription termination factor 3, mitochondrial 247 434 IPR038538 -
Tpr5g1762 451 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 84 443 - -
Tpr5g1762 451 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Tpr5g1762 451 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Tpr5g1762 451 SMART mt_12 333 364 IPR003690 GO:0003690|GO:0006355
Tpr5g1762 451 SMART mt_12 365 399 IPR003690 GO:0003690|GO:0006355
Tpr5g1762 451 Pfam mTERF 315 416 IPR003690 GO:0003690|GO:0006355
Tpr5g1762 451 Pfam mTERF 147 306 IPR003690 GO:0003690|GO:0006355
Tpr5g1762 451 PANTHER CGI-12 PROTEIN-RELATED 84 443 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1762 Tpr-Chr5 35653517 35656973 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1762 mTERF 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1762 K15032 - gmx:102663414 347.051