Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1759 ATGTTCAACAAATGTTTTCTCTCTCACAATCTTGTTTTAGGGTTCATCACAACAAAATCAACAGCCCCTAAATCCGAATCTCTTTTTCAATTTCAAAACTTTTCCTTACCAATTTCACTCAGATACTGCACCACCACCACCACCACCACCACAACAACAACAACAGCATCAGAATCAGAATCAGACACACTCCCATTCGCTGTATCATACCTCATCAACAATTTTGGTTTCTCACATGAATCAGCTCTCAGAGCTTTCAACAACAAACAGGTTCGTTTCAATACCATAGAAAAGCCTAATTCAGTTATCAACTTCTTTAAAAACCATGAATTTTCACATTCCAACATACGCACCATCATAAAAAAAGAACCTTGGTTACTTTCATCAAAACCCCACAATGTAATTTTGCCAAAGTTTCAATTTTTTCTATCCAAAGGTGCTTCTTATTCTGATATCGTTTCATTGTTGACAGCATACCCTAGAATTTTACAAAGTAGCTTGGTGAAACGAATAATCCCTATTTTTGAATTATTAAGTAAGTTCTTGAAAACCAACAAGGATACCATTGTTTGCTTAATTCGAAATTGGCCTTCATTTGTTGATTATCCATATGACCGTATTGCGGCTAATATTAATTTGCTGAGAGATTTTGGAGTATGTGATTCTGGCATTGCTAGATTGATTCTGACAGGACCATCTATACTTGGTTCAACTGATTTGATTAATACTTTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAACTTCCACTTTTGTGATAGCTTTGGTTGCAAAGAAATGTATGATTAAAAAACTTTGGGATGAGAAAGTTGATGCCTTTAAAAAGTGGGGTTGGTCTGATGAAGATATTATGGAAGCATTTAGAAAGCATCCTCACTTTATGTTTACATCCATCGATAAAATTAATTTATTGATGGGATTTTGGGTCAATCAGTTGGGTTGGGATGCTACGCCCATTGCCAAACTACCAAAGATTTTTGGTTCAAGTCTGGAGAGAAGGATCATACCAAGAGCCACGGTTGTGCAATATCTTTTGAAGAAAGGTTTGCTGAGAAAGAAAGCAAGCTTAACTGCTCCATTTGTAGTCAGCGATAAGTTGTTCCTTGACAAATATATAAACTGTTATAAGGAGGAGTCATCTTATCTATTAAAGCTTTATGCAGAAACACTGAAACTTGCACAAACCAAGGACAAAACTGACCAAATGTCATGA 1236 0.36 MFNKCFLSHNLVLGFITTKSTAPKSESLFQFQNFSLPISLRYCTTTTTTTTTTTTASESESDTLPFAVSYLINNFGFSHESALRAFNNKQVRFNTIEKPNSVINFFKNHEFSHSNIRTIIKKEPWLLSSKPHNVILPKFQFFLSKGASYSDIVSLLTAYPRILQSSLVKRIIPIFELLSKFLKTNKDTIVCLIRNWPSFVDYPYDRIAANINLLRDFGVCDSGIARLILTGPSILGSTDLINTLEEVKGLGFDPSTSTFVIALVAKKCMIKKLWDEKVDAFKKWGWSDEDIMEAFRKHPHFMFTSIDKINLLMGFWVNQLGWDATPIAKLPKIFGSSLERRIIPRATVVQYLLKKGLLRKKASLTAPFVVSDKLFLDKYINCYKEESSYLLKLYAETLKLAQTKDKTDQMS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1759 411 PANTHER CGI-12 PROTEIN-RELATED 34 402 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 SMART mt_12 190 220 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 SMART mt_12 225 253 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 SMART mt_12 324 358 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 Pfam mTERF 103 236 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 Pfam mTERF 275 376 IPR003690 GO:0003690|GO:0006355
Tpr5g1759 411 Gene3D Transcription termination factor 3, mitochondrial 164 393 IPR038538 -
Tpr5g1759 411 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 34 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1759 Tpr-Chr5 35627075 35630398 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1759 mTERF 5.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1759 K15032 - gmx:102663414 337.421