Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1757 ATGTTGAAAAGGTTTCTATGCCGACAGAATGTTCTTTTAGGGTTCATCTCAACAAACCCTAAATTGTATCCTCTTCCTCAACACTTTTCATTCCCAATTTCATTTAGATACTTCACAACCACAACATCAGAATCAGAATCAGATACACACCCATTCGCTGTATCATACCTCATCAACAATTTCGGTTTCTCACATAAATCAGCTCGCACAGCTTTCAAAAACAAACAGGTTCGTTTTAAATCTCCTGATAAGCCTAATTCTGTTATCAACTTCTTCAAAAATCATCATTTTTCACAATCCAACATACACACCATCATTGCAAAAGAACCGTGGTTACTTTCATCACAACCCAACAATGCAATTTTACCAAAGTTTGAATTTTTTCTATCAAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTAACTGCAAACCCTAGAATTTTACATTGTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAACTATTAAGTAGGTTCGTGAAAACCAACAAGGATGTCATTGTTTGCTTAATTCGACATTCGTATTCATTTGATCGTATTTCATATAAACACATTGTGGGTAATATCAATTTGATGAGTGATTTTGGAGTATGTGATTCTATCATTGCTAGATTGCTTCAAACAAGGCCATCAATGTTTAGTTCAACTGAATTGATTAAGACATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGACTACTTTTGGGGCTGCTTTGATAGCCAAGAAATGTGTGAGTAAAAAACATTGGAATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGATATTGTTAAAGCATTTAGGGGTAGGCCTGATCTTTTGTTGGCTTCCTTGGATAGGATTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGCACTTACCAAACGGCCACAGATGTTTGGTTATAGTTTCGAAACAAGGATCATCCCAAGGGCCTCAGTTCTGCAATTTCTTCTGATGAAATGTTTGCTAAAAAAGAATGCAAGCTTAGTTAACCCATTTAGGTATTCTGAGAATTTGTTTTTGAAAAAGTTTGTTTTTTCATTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATCAGGAAAAAATGAAACTTGTATACACGACGGAACACAATGGCATGCCACTCACTAAATAG 1200 0.3525 MLKRFLCRQNVLLGFISTNPKLYPLPQHFSFPISFRYFTTTTSESESDTHPFAVSYLINNFGFSHKSARTAFKNKQVRFKSPDKPNSVINFFKNHHFSQSNIHTIIAKEPWLLSSQPNNAILPKFEFFLSKGVSSSDIVSLLTANPRILHCSLEKRIIPLFELLSRFVKTNKDVIVCLIRHSYSFDRISYKHIVGNINLMSDFGVCDSIIARLLQTRPSMFSSTELIKTLEEVKGLGFDPSMTTFGAALIAKKCVSKKHWNEKVDTFKKWGWSDEDIVKAFRGRPDLLLASLDRINLVMSFWVNQLGWNSLALTKRPQMFGYSFETRIIPRASVLQFLLMKCLLKKNASLVNPFRYSENLFLKKFVFSFKEESDYLLKLYQEKMKLVYTTEHNGMPLTK* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1757 399 SMART mt_12 310 345 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 SMART mt_12 211 239 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 389 - -
Tpr5g1757 399 PANTHER CGI-12 PROTEIN-RELATED 22 389 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 Pfam mTERF 89 227 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 Pfam mTERF 255 359 IPR003690 GO:0003690|GO:0006355
Tpr5g1757 399 Gene3D Transcription termination factor 3, mitochondrial 170 378 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1757 Tpr-Chr5 35609863 35611580 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1757 mTERF 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1757 K15032 - gmx:102663414 329.331