Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1755 ATGTCGAAATTGTTTCTATGCCCACCGAATGTTGTTTTAGGGTTCATAACAACAAACCCTAAATTCGACCCTCTTTCTCAGAAACACTCTTCATTCCCAATTTCACTCAGATTCAGATGCTGCACCGCAGCAACAACAACAACAACAACAATAACAGCATCAGAATCAGACACACACCCATTCGCTGTATCATATCTCATCAACAATTTTGATTTCTCACCTGAATCAGCTCTCAAATATTTCAACAGCAATAAGGTTCGTTTCAATACCTTAGAAAAGCCTAATTCGGTTATCACCTTCTTAAAAAACAATGGGTTTTCACACTCCGACATACGCATTATCATCACAAAATCACCATGGTTACTTTCATCAAAACCCCATAAAACCTTATTGCCAAAGTTTCAATTTTTTCTATCCAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTGACAGCAAACCCTGGAATTTTACTACATGGCTTGAAGAAACGAATAATCCCTCTTTTTGAATTATTAAGTAGGTTCTTGAAAACCGACAAGCATGTCATTGTTCGCTTAATTCGACAATGGCATTCATTTGATTGTATGTCATATGACCTTATTGTGGCTAATATCAATTTGATGAGTGATTTTGGAGTTTGCAATTCTGCCATTGCTGTATTCTTTCAAACAAATACATCTATATTCGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAACGACTACTTTTGGGGTTGCTTTGATGGCCAAGAAATGTATGAGTAAAACACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGCTATTTTTCAAGCATTTAGGTCATATCCTAATTTGATGATGGTTTCAATTGATAAGATTAATTTATTGATGACTTTTTGGGTCAATCAAATGGGTTGGCATTCCTTGGCACTTACTAAATCTCCAAATATGTTTACTTATAGTTTACATAAAAGTTTACATAAAAGGATCATTCCAAGGGCTTCAATTTTGCAATATCTTTTGATGAAAGGTTTGCGAAAAAACAATGCCAGCTTAGTTATGCCATTTAGTTATAATGAGAAAATGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGGTATATGAGGAAAAAATGAAAACAACGGCATGCCACTCGCTAAATAGGTTTTTGGATGATAAATATCATCCGAAAATGCGGTAA 1257 0.3484 MSKLFLCPPNVVLGFITTNPKFDPLSQKHSSFPISLRFRCCTAATTTTTTITASESDTHPFAVSYLINNFDFSPESALKYFNSNKVRFNTLEKPNSVITFLKNNGFSHSDIRIIITKSPWLLSSKPHKTLLPKFQFFLSKGVSSSDIVSLLTANPGILLHGLKKRIIPLFELLSRFLKTDKHVIVRLIRQWHSFDCMSYDLIVANINLMSDFGVCNSAIAVFFQTNTSIFGSTDLIKSLEEVKGLGFDPSTTTFGVALMAKKCMSKTLWNQKVDVFKKWGWSDEAIFQAFRSYPNLMMVSIDKINLLMTFWVNQMGWHSLALTKSPNMFTYSLHKSLHKRIIPRASILQYLLMKGLRKNNASLVMPFSYNEKMFLSKFVFSFKEESDYLLKVYEEKMKTTACHSLNRFLDDKYHPKMR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1755 418 Gene3D Transcription termination factor 3, mitochondrial 162 391 IPR038538 -
Tpr5g1755 418 SMART mt_12 319 357 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 SMART mt_12 220 248 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 402 - -
Tpr5g1755 418 Pfam mTERF 98 228 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 Pfam mTERF 266 374 IPR003690 GO:0003690|GO:0006355
Tpr5g1755 418 PANTHER CGI-12 PROTEIN-RELATED 27 402 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1755 Tpr-Chr5 35553832 35557572 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1755 mTERF 2.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1755 K15032 - gmx:102663414 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1755 5 35553832 35557572 Tpr5g1755 5 35553832 35557572 ECH