Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1754 ATGGAATTATCAGATCGGTTACGGTTTCTAAACTCAATCCTTGAGATTGCTGAAGAAGTCGGCGGATTTTCTGTTGAGATTCCTTCCATATCAGCTTTTGCACCATTTGGTGATTTAGGGTTTTTGTACGATTGTACTCTGAAACCATCTCATTCATTATTTCAAACCAACATGTCTAAATGGTTTCTATGCCGCCAGAATGTTGTTTTAGGGTTCATGACAACAAAATCAACAATCCCTAAATTCGACCCTTTTTCGTTCCCAATTTCACTCAGATTCTTCACCACAACATCGGAATCAGACACAATCCCATTCGCTGTATCATATCTCATCAACAATTTCGGTTTCTCGCCTCAATCAGCTCTCACAGCTTTCAACCGAAGACAGGTTCGTTTCAAATCTCCAGATAAGCCTAATTCTGTTATCAACTTCTTCAAAAATCATCATTTTTCAGACTCCAACATACGCATCATCATTACAAAAGCACCATGGTTACTTTCATCACAACCCAACAATGCAATTTTACCAAAGTTTGAATTTTTTCTATCAAAAGGTGCTTCTTCCTCTGATATTGTTTCATTGTTAACTGCAAACCCTAGAATTTTACATTGTAGCTTGGAGAATCGAATAATCCCTCTTTTTGAAATATTAAGTAGGTTCTTGAAAACCAATAAGGATGTCATTGTTTGCTTAATTCGACTTTCGTCGACTTCATTTTCTCGTACTTCATATGACATTATTGCGGCTAATGTCAATTTGATGAGTAATTTTGGAGTATGTGATTCCAGCATTGCTAGATTGTTTCAAACAAGGCCATCTATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTCGTCCTTCAATGATTACTTTTGGGGTTGCTTTGATAGCCAAGAAATGTACGAGTAAAACACATTGGAATCATAAAGTTGATGCATTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTTTTCAAGCATTTAGGTTGTGCCCTAGTTTGATGTTGGTTTCGATTGATAAGGTTAATTTATTGATGTCTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGCACTTACTAAATATCCAATTATGTTTAGTTATAGTTTACATAAAAGAATCATTCCAAGGGTTTCAGTTTTGCAATTTCTTCTGATGAAAGGTTTGCGAGAAAAGAATGCAAGTTTACTTACACCATTTACTTATACGGAGAAATTGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAAGGGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAGTGAAACTCGCATACTCAGAGGAAACCAATGGCATGCCACTGACTGAATAG 1362 0.3598 MELSDRLRFLNSILEIAEEVGGFSVEIPSISAFAPFGDLGFLYDCTLKPSHSLFQTNMSKWFLCRQNVVLGFMTTKSTIPKFDPFSFPISLRFFTTTSESDTIPFAVSYLINNFGFSPQSALTAFNRRQVRFKSPDKPNSVINFFKNHHFSDSNIRIIITKAPWLLSSQPNNAILPKFEFFLSKGASSSDIVSLLTANPRILHCSLENRIIPLFEILSRFLKTNKDVIVCLIRLSSTSFSRTSYDIIAANVNLMSNFGVCDSSIARLFQTRPSIFGSTDLIKSLEEVKGLGFRPSMITFGVALIAKKCTSKTHWNHKVDAFKKWGWSDEAVFQAFRLCPSLMLVSIDKVNLLMSFWVNQLGWNSLALTKYPIMFSYSLHKRIIPRVSVLQFLLMKGLREKNASLLTPFTYTEKLFLSKFVFSFKGESDYLLKLYEEKVKLAYSEETNGMPLTE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1754 453 SMART mt_12 265 293 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 SMART mt_12 364 398 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 SMART mt_12 192 223 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 SMART mt_12 332 363 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 Gene3D Transcription termination factor 3, mitochondrial 231 426 IPR038538 -
Tpr5g1754 453 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 77 443 - -
Tpr5g1754 453 Pfam mTERF 142 275 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 Pfam mTERF 310 415 IPR003690 GO:0003690|GO:0006355
Tpr5g1754 453 PANTHER CGI-12 PROTEIN-RELATED 77 443 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1754 Tpr-Chr5 35497252 35506099 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1754 mTERF 2.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1754 K15032 - gmx:102663414 315.849