Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1753 ATGTTGAAATGGTTTCTCCACAAGAATGTTGTTTTAGATCTCATCACAACAAAATCACAATCAACAACCCCAAAATTCAACCCTCTTCTTCAACATCTGAATTCCTCATTTTCATTCAGATATTGCAGCACAACAACAACCACATCACAATCAGAATCAGGTAAACATCCATTTGCTGTATCATACCTCATCAACAATTTTGGTTTCTCACATGAATCAGCTCTCAAAGCTTTCAACCAAAAACGTGTTCGTTTCAATACCCTAGAAAAGCCTAATTCAGTTATCAAATTCTTCAAAAACAATGGTTTTTCACACTCCAACATAGGTATCATCATTAGAAAAGAGCCATGGTTACTTTCATCACAACCCCACAAAAGGTTATTGCCAAAGTTTCAATTTTTTATCTCAAAAGGTGTTTCTTCTTCTGATATTGTTTCATTGTTAACTGCAAACCCTAGAATTTTACATATTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTATTAAGTAAGTTCTTTAAAACCAACAAGGATGTCATTTTTTGCTTGATTCGAAGATCGTATGGATTTAGTCATTATACCTATGACCGTATTGTGGCTAATATCAATTTGATGAGTGCTTTTGGTGTATGTGATTCCGGCATTGGTAGTGTGCTTCTGATAGCACCATCTATAATTTGTTCAACTGATTTGATTGATACTTTGAAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAAATATTACTTTTGGGCAGGCTATGATAGCCAAGAAAGGGTTGAGCAAAAAAATTTGGGATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGCATTTTTTCAAGTATTTAGGTCACGTCCTAATTTGATGATGGTGTCAATTGATAAGGTTAATTTATTGATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGCACTTACTAAAATGCCACAGATTTTCAGTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTATTGCAATATCTTTTGATGAAAGGTTTGCGAAAAAACAATGCGAGCTTAGTTACGCCATTTAGTTATAATGAGAAAATGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGGGGAGTCTGATTATCTATTAAAGCTATACGAGGAAAAAATGAAACTTGCATACTCAGAGGAAAACAATGGCATGCCACTCACTAAATAG 1218 0.3456 MLKWFLHKNVVLDLITTKSQSTTPKFNPLLQHLNSSFSFRYCSTTTTTSQSESGKHPFAVSYLINNFGFSHESALKAFNQKRVRFNTLEKPNSVIKFFKNNGFSHSNIGIIIRKEPWLLSSQPHKRLLPKFQFFISKGVSSSDIVSLLTANPRILHISLEKRIIPLFELLSKFFKTNKDVIFCLIRRSYGFSHYTYDRIVANINLMSAFGVCDSGIGSVLLIAPSIICSTDLIDTLKEVKGLGFDPSNITFGQAMIAKKGLSKKIWDEKVDTFKKWGWSDEAFFQVFRSRPNLMMVSIDKVNLLMSFWVNQLGWNSLALTKMPQIFSYSLHKRIIPRASVLQYLLMKGLRKNNASLVTPFSYNEKMFLSKFVFSFKGESDYLLKLYEEKMKLAYSEENNGMPLTK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1753 405 PANTHER CGI-12 PROTEIN-RELATED 26 395 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 395 - -
Tpr5g1753 405 Pfam mTERF 261 367 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 Pfam mTERF 95 236 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 Gene3D Transcription termination factor 3, mitochondrial 174 378 IPR038538 -
Tpr5g1753 405 SMART mt_12 217 245 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Tpr5g1753 405 SMART mt_12 316 350 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1753 Tpr-Chr5 35488299 35493580 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1753 mTERF 5.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1753 K15032 - gmx:102663414 317.005