Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1752 ATGTTGAAATGGTTTCTCCACAAGAATGTTGCTTTAGATCTAATCACAACAAAATCACAATCAACAACCCCAAAATTCAACCCTCTTCTTCAACATTTGTATTCCTCATTTTCATTCAGATATTGCAGCACAACAACAACCACATCACCATCACAATCACAATCAGAATCAGAATCAGATAGACATCCATTTCCAGTATCATACCTCATCAACGATTTTGGTTTCTCAACTCAATCAGCTCTCAAAGCTTTCAACAAAAAACAGGTTCGTTTCAATACCCTAGAAAAACCTAATTCAGTTATCACATTTTTCAAAAGCCATGGTTTTTCATACTCCAAGATATGTATCATCATTAGAAAACAACCATGGTTACTTTCATTAGATCCCCGCAAAAGGTTATTGCCAAAGTTTAAATTTTTTCTATCCAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTGACAGAAAACCCTAGAATTTTACAATTTGGCTTGGGGAAACGAATAATCCCTCTTTTTGAATTATTAAGTAGATACTTGAAAACCAATAAGGATGTCATTGTTTGCTTAATTCGACATTCGTCTTCATTTTCTGTTTGTCCCTGTCGTCGTATTGTGGCTAATATCAAATTGATGAGAGATTTTGGGGTATGTGATTCTGCCATTGAGAGATTGTTTCAAACAAGGCCGTCTATATTTGGTTCAAATGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTCAGGGTTTGATCCTTCAATGACTATTTTTGGGACTGCTTTGATGACCATTTGGGATTATAAATTTGATACCTTTAAGAAATGGGGTTGGTCTAATCAAACTGTTATTCGAGTATTTAGGTTTCATCCTGATCTGTTGTCTACTTCCATTGATAAGATTAATTTGGTGATGAATTTTTGGGTCAATCAATTGGGTTGGGATTCCTTGGCACTTATTAAATGTCCACATATGTTTGGTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTGTTGCAATATCTTTTGACGAAAGGTCTGCTAGAAAAGAATGCAAGCTTAGTTAAGCCATTTACTTATTCTGAGAAGTTGTTCTTGAGCAAGTTTGTTTTTAGGTTTAAGGAGTCTGATTATCTATTAAAGCTATATGAGGACAAAATGAAACTTGAATACACAGAGGAGAAGAACAATGGCATGCCGTTCACTAAATAG 1215 0.3465 MLKWFLHKNVALDLITTKSQSTTPKFNPLLQHLYSSFSFRYCSTTTTTSPSQSQSESESDRHPFPVSYLINDFGFSTQSALKAFNKKQVRFNTLEKPNSVITFFKSHGFSYSKICIIIRKQPWLLSLDPRKRLLPKFKFFLSKGVSSSDIVSLLTENPRILQFGLGKRIIPLFELLSRYLKTNKDVIVCLIRHSSSFSVCPCRRIVANIKLMRDFGVCDSAIERLFQTRPSIFGSNDLIKSLEEVKGSGFDPSMTIFGTALMTIWDYKFDTFKKWGWSNQTVIRVFRFHPDLLSTSIDKINLVMNFWVNQLGWDSLALIKCPHMFGYSLHKRIIPRASVLQYLLTKGLLEKNASLVKPFTYSEKLFLSKFVFRFKESDYLLKLYEDKMKLEYTEEKNNGMPFTK* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1752 404 PANTHER CGI-12 PROTEIN-RELATED 51 393 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 Pfam mTERF 102 233 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 Pfam mTERF 268 366 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 51 393 - -
Tpr5g1752 404 SMART mt_12 223 251 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 SMART mt_12 151 183 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 SMART mt_12 115 146 IPR003690 GO:0003690|GO:0006355
Tpr5g1752 404 Gene3D Transcription termination factor 3, mitochondrial 167 379 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1752 Tpr-Chr5 35470713 35472743 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1752 mTERF 1.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1752 K15032 - gmx:102663414 301.212