Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1751 ATGGAAGAGAGAAATAAAGGGAATTTTGAACTCTTATCCTCTGCATTCTGCAAGACTGCAACACAAAGAAACTCTCATTATTCCAAACAAACCATGTCGTTTATATGCCCACCGAATGTTGTTTTAGGGTTCATCAAAACAAACCCTAAATTCGACCCTCTTTCTCAAAAACACTCTTCGTTCCCAATTTCACTCAGATTCAAATGCTGCACCGCAACAACAGCATCAGAATCAGACAGGTACCCATTCCCTGTATCATACCTCATCAACAACTTCGATTTCTCACCTAAATCAGCTCTCATATATTTCAAAAACAACCATCTTCGTTTCGATACCGTTGAAAAACCTAATTCAGTTATCAACTTCTTTATAAACAATGGATTTTCACATTCCGACATATGCATCATCATCAGAAAAGCACCATGGTTACTTTCAGAAGAACCCCATGAAAGCTTATTGCCAAAGTTTCAATTTTTTCTATCCAAAGGCGTTACTTCTTCTGATATTGTGTCATTGTTGACAGCAAACCCTAGAAGTTTAAAAGTTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTATTTAGTAAGTTTATGAAAACCAACAAGGATGTGGTTTGCTTAATTAGACATTTGTATTCATTTGACCGTGCTCCACATGACCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTGCAATTCTGCCATTGCAAGATTGGTTCAATCAAGGCCATATATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAAGGACTACTTTTGCAGCTGCTTTGATAGCCAAGAAATGTATGAGTAAAAAACATTGGGATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATAAAGATATTGTTAAAACATTTAGGTCTCATCCTGATCTGTTGTCTACTTCCATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGTACTTACTAAATGTCCAAATATGTTTACTTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTCTGCAATTTCTTCTGATGAAAGGTTTGCTAGAAAAGAAAGCAAGCTTAGTTAACCCATTTAAGCATTCTGAGAATTTGTTTTTGGAAAAGTTTGTTTTTTCCTTTAAGGAGGAGTCTGATTATCTATTAGAGTTATATGAGGAAAAATTGAAACTTGCAAAGACAAAGGAGAAAAATGGCATGCCATCTACCAACATTGTTCTTTTGTGA 1302 0.3525 MEERNKGNFELLSSAFCKTATQRNSHYSKQTMSFICPPNVVLGFIKTNPKFDPLSQKHSSFPISLRFKCCTATTASESDRYPFPVSYLINNFDFSPKSALIYFKNNHLRFDTVEKPNSVINFFINNGFSHSDICIIIRKAPWLLSEEPHESLLPKFQFFLSKGVTSSDIVSLLTANPRSLKVSLEKRIIPLFELFSKFMKTNKDVVCLIRHLYSFDRAPHDLIVANINLMTDFGVCNSAIARLVQSRPYIFGSTDLIKSLEEVKGLGFDPSRTTFAAALIAKKCMSKKHWDEKVDTFKKWGWSDKDIVKTFRSHPDLLSTSIDKINLVMSFWVNQLGWNSLVLTKCPNMFTYSLHKRIIPRASVLQFLLMKGLLEKKASLVNPFKHSENLFLEKFVFSFKEESDYLLELYEEKLKLAKTKEKNGMPSTNIVLL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1751 433 PANTHER CGI-12 PROTEIN-RELATED 45 419 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 SMART mt_12 241 269 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 SMART mt_12 340 374 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 SMART mt_12 308 339 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 Pfam mTERF 120 251 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 Pfam mTERF 285 391 IPR003690 GO:0003690|GO:0006355
Tpr5g1751 433 Gene3D Transcription termination factor 3, mitochondrial 97 210 IPR038538 -
Tpr5g1751 433 Gene3D Transcription termination factor 3, mitochondrial 211 405 IPR038538 -
Tpr5g1751 433 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 45 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1751 Tpr-Chr5 35465406 35470269 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1751 mTERF 5.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1751 K15032 - gmx:102667698 293.893