Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1749 ATGTCTGTTCTAAAGTATGATGTGTTCCTGAGTTTTAGAGGAGAGGATACTCGTGGCAACTTCACAAGTCATCTTCATAAAGAATTGTGTAGGAAAAACATTAAAATATTCATAGTTTATGGACTTGAGAGAGGTGATGAGATTTCCCAAGCACTGTACAAAGCAATAGAAGAATCAACAATTTATGTGGTCATTTTGTCAGAACACTATGCTTCTTCAAGTTGGTGCTTAGATGAACTGACAGAGATACTGAAATTTAAGGAGAGATATGGAAGGCAAGTCATACCGGTGTTCTATAAGGTGGATCCATCAAATGTTAGGCATCAGAGACAGAGTTATGCAGATGATTTAGTTAAGCATCATCAACGATTTGGTGGCAAAGTGGATACGTGGAAGGCTTCTCTAACCCAAGTAGCTGGACTTTCAGGCTGGGATTCACAAGCAACCAGACCAGAAAGCACACTTGTTACAGAGATTGTGAAAGATATTTCGAAAAAATTGAACAATTGTTTCTTAAGTGATCCTGAAGGAATAACTGGAATTGACATGCATATTGAACAAATTCAATCCTTGTTGTGCCTCGAGTTACCGACTGTTTGTATCATAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTGCCAATGCAATCTTTGAAATACTTGCAACTCAGTTCAGTTCCAAAAGCCTTATTCGAAATGTTAAACAAGAAATAGAAAGAGTTGGACTATCCCATGTAAAAAATGAATACTTATCACAACTTCTAAATGAAAGAATTGCATCCTCTGAATCCAATTCTTACGATCAAAGGCTGAAACGAACAAAGGGTCTCATTGTTTTTGATGATGTGAAAGATGCAGATCAACTTAAAGATTTAATTGGAACACATCGTAAGTTTGGCCAGGGGAGTAGAATTATTATGACTAGTAGAGACAGGCAAGTGCTTGAGAATGCCAATGCTGATGAAATATATCAAGTTAGGGAAATGGATTATCAAGATTCTCTACAACTCTTCTGTTTATTAGCCTTTAAACAAAACCATCCAATAGAATCTTTTGCGAGCTTAACAGAAAAGGTTTTAGATTATGCCAAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCATTGCTTTATGGAAGAACAAAGGAAGCATGGAAAAGTGAGTTGCAAAAGCTGGAAAAGCTTCCCGATCTTAAAATTTTTAGATTGTTGAAATTAAGTTATGATGGACTTGATGAAGAACAAAAGGATATATTTCTTGACATAGCTTGCTTCCATAGAGGAGAATTGGAGAAAGATGTAGCACTAACATTGAACTCTTGTGGTTTCTTTGCTTACATCGGAATGGATGTTCTCAAAGATAGGTGCCTTATATCTATTTCAGATGATACTATTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTACGGCTTCAAGGTGTCAATGATCCTGGAAAACGCAGTCGATTATGGAAGTATGAGGATGTTTATGATGTTATAAGAACAAGGGAACAGATGAGATCCAGTGTATATTTTGTGATATAA 1560 0.3667 MSVLKYDVFLSFRGEDTRGNFTSHLHKELCRKNIKIFIVYGLERGDEISQALYKAIEESTIYVVILSEHYASSSWCLDELTEILKFKERYGRQVIPVFYKVDPSNVRHQRQSYADDLVKHHQRFGGKVDTWKASLTQVAGLSGWDSQATRPESTLVTEIVKDISKKLNNCFLSDPEGITGIDMHIEQIQSLLCLELPTVCIIGIWGMGGIGKTTIANAIFEILATQFSSKSLIRNVKQEIERVGLSHVKNEYLSQLLNERIASSESNSYDQRLKRTKGLIVFDDVKDADQLKDLIGTHRKFGQGSRIIMTSRDRQVLENANADEIYQVREMDYQDSLQLFCLLAFKQNHPIESFASLTEKVLDYAKGLPLALKVLGSLLYGRTKEAWKSELQKLEKLPDLKIFRLLKLSYDGLDEEQKDIFLDIACFHRGELEKDVALTLNSCGFFAYIGMDVLKDRCLISISDDTIWMHDLIQEMGHEIVRLQGVNDPGKRSRLWKYEDVYDVIRTREQMRSSVYFVI* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1749 519 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 144 IPR035897 -
Tpr5g1749 519 PRINTS Disease resistance protein signature 201 216 - -
Tpr5g1749 519 PRINTS Disease resistance protein signature 272 286 - -
Tpr5g1749 519 PRINTS Disease resistance protein signature 365 379 - -
Tpr5g1749 519 SMART till_3 5 141 IPR000157 GO:0007165
Tpr5g1749 519 Pfam TIR domain 5 173 IPR000157 GO:0007165
Tpr5g1749 519 SUPERFAMILY "Winged helix" DNA-binding domain 401 505 IPR036390 -
Tpr5g1749 519 Gene3D - 169 328 IPR027417 -
Tpr5g1749 519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 510 IPR044974 GO:0006952
Tpr5g1749 519 Pfam NB-ARC domain 183 396 IPR002182 GO:0043531
Tpr5g1749 519 Gene3D - 2 168 IPR035897 -
Tpr5g1749 519 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 510 - -
Tpr5g1749 519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 424 IPR027417 -
Tpr5g1749 519 ProSiteProfiles TIR domain profile. 4 167 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1749 Tpr-Chr5 35450169 35454010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1749 6 505 WRKY Transcription Factor Family AT4G12020 31.650 4.46e-70 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1749 - - lja:Lj1g3v3947020.1 629.787