Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1747 ATGTCCAAATTGTTTCTATGCGTGCCAAATCTTGTTTTAGGGTTCATAACAACAAACCCTAATTTCGACCCTCTTTCTCAAAAACACTCTTCGTTCCCAATTTCACTCAGATTCAAATGCTGCACCGCAACACCAACAACAACAATAACAATAACAGCATCAGAATCAAAATCAAAATCAAAATCAGACAGGTACCCATTCCCTGTATCATATCTCATCAACAATTTCGATTTCTCACCTGAATCAGCTCTCAAATATTTCAACAACGGCCATCTTGGTTTCAATACCGTTGAAAAACCTAATTCAGTTATCAACTTCTTTCTTAACAATGGATTTTCACATTCCGACATACGCATCATCATCAGAAAATCACCATCGTTACTTTCATCAAGACCCCATAAAAGGTTATTGCCAAAGTTTGAATTTTTTCTATCCAAAGGTGTTTCTTCATCTGATTTTGTTCCATTGTTAACTGCAAACCCTCAAATTTTACGAAGTAGCTTGGAGAACCGAATAATCCCTCTTTTTGAATTATTAAGTAAGTTCTTGAAAACCAACAAGGATATCATCGCTTGCTTAATTATATGTTCGCAGTTATCGGCTCATCCCTGTGAACGTATTGTGGCTAATATCAATTTGTTGACTGATTTTGGAGTTTGTAATTCTGCCATTGCAAGATTGTTTAAAACAAGGCCATCTATATTTGGTTCAACTGATTTGATTAAGTCTTTGGAAGAAGTTAAGGGTTTAGGGTTTGATCCTTCAGTGATTAATTTTGGGATAGCTTTGATGGCCAAGAAAGGTATGAGTGAAAAACTTTGGGATGAGAAAGTTGATACCTTCAAGAAATGGGGTTGGTCTGATGAAGTTGTTTCTCGTGCATTTAGGTCACATCCTGCTGTTATGTTGGTTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGCAATTACTAAAAAGCCACTTGTTTTAAGTTATAGTTTGCAGAAAAGGATCATTCCAAGGGCCTTGGTTCTGCAATATCTTCTGATGAAAGGTTTAAGAAACAAGGATGCAAGCTTAGTTATACCCTTTACTTATACTGAGGATTTGTTTCTGAACAAGTTTGTTTTCTCCTTTAAAGAGGAATCTGATTATCTATTAAAGCTATATGAGGAAAAAATCAAACTTGCAAATACAAAGGAGAAAAAGGGCAGGAATCAATCTGTTGAGAAAGATAAGGCCACTAATATTCTAGTTTATGGTTGA 1278 0.3529 MSKLFLCVPNLVLGFITTNPNFDPLSQKHSSFPISLRFKCCTATPTTTITITASESKSKSKSDRYPFPVSYLINNFDFSPESALKYFNNGHLGFNTVEKPNSVINFFLNNGFSHSDIRIIIRKSPSLLSSRPHKRLLPKFEFFLSKGVSSSDFVPLLTANPQILRSSLENRIIPLFELLSKFLKTNKDIIACLIICSQLSAHPCERIVANINLLTDFGVCNSAIARLFKTRPSIFGSTDLIKSLEEVKGLGFDPSVINFGIALMAKKGMSEKLWDEKVDTFKKWGWSDEVVSRAFRSHPAVMLVSIDKINLVMSFWVNQLGWNSLAITKKPLVLSYSLQKRIIPRALVLQYLLMKGLRNKDASLVIPFTYTEDLFLNKFVFSFKEESDYLLKLYEEKIKLANTKEKKGRNQSVEKDKATNILVYG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1747 425 Gene3D Transcription termination factor 3, mitochondrial 178 392 IPR038538 -
Tpr5g1747 425 Pfam mTERF 104 235 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 Pfam mTERF 269 365 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 SMART mt_12 324 358 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 SMART mt_12 225 253 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Tpr5g1747 425 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 51 403 - -
Tpr5g1747 425 PANTHER CGI-12 PROTEIN-RELATED 51 403 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1747 Tpr-Chr5 35428152 35430696 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g1747 mTERF 3.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1747 K15032 - gmx:102663414 320.087